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scnpilot_solids2_trim150_scaffold_2470_curated

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2470_curated_1
unknown

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comp(1..525)
DNA (525bp) protein (175aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2470_curated_2
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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635..3082
DNA (2448bp) protein (816aa)
Polysaccharide export protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCN4_9SPHI
Polysaccharide export protein {ECO:0000313|EMBL:EHQ24221.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
periplasmic protein involved in polysaccharide export
scnpilot_solids2_trim150_scaffold_2470_curated_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3104..4153
DNA (1050bp) protein (350aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZP5_9SPHI
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EHQ27737.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
lipopolysaccharide biosynthesis protein
scnpilot_solids2_trim150_scaffold_2470_curated_4
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4163..5257
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1R9_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08382.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_2470_curated_5
Bacteroides sp. CAG:98, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5266..6357
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 195 (3-7155360) RepID=T7TU79_ECOLX
Putative LPS biosynthesis related protein {ECO:0000313|EMBL:CDF14299.1}; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2470_curated_6
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6360..7289
DNA (930bp) protein (310aa)
Glycosyl transferase n=1 Tax=Agarivorans albus MKT 106 RepID=R9PN54_AGAAL
Glycosyl transferase {ECO:0000313|EMBL:GAD02735.1}; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" source="Agarivorans albus MKT 106.;"
glycosyl transferase family protein; K07011
scnpilot_solids2_trim150_scaffold_2470_curated_7
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7305..8366)
DNA (1062bp) protein (354aa)
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
scnpilot_solids2_trim150_scaffold_2470_curated_8
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8536..8901
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1LFV9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKB49158.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2470_curated_9
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8898..9326
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1LA78_9BACT
WxcM domain-containing protein {ECO:0000313|EMBL:AKD01955.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
WxcM-like protein
scnpilot_solids2_trim150_scaffold_2470_curated_10
unknown

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comp(9323..9451)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2470_curated_11
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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9477..9647
DNA (171bp) protein (57aa)
Transferase hexapeptide repeat containing protein id=3759938 bin=GWF2_Bacteroidetes_33_38 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
Tax=GWF2_Bacteroidetes_33_38_curated
Displaying 11 items

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