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scnpilot_solids2_trim150_scaffold_1373_curated

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1373_curated_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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294..818
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ09_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97526.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1373_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(926..1435)
DNA (510bp) protein (170aa)
Amidohydrolase 3 n=1 Tax=Niabella soli DSM 19437 RepID=H1NJY7_9SPHI
Deaminase {ECO:0000313|EMBL:AHF14074.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
amidohydrolase
scnpilot_solids2_trim150_scaffold_1373_curated_3
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1448..1855)
DNA (408bp) protein (136aa)
NAD(P)H quinone oxidoreductase, PIG3 family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAT4_CHIPD
Zinc-binding dehydrogenase {ECO:0000313|EMBL:KFF00591.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
NAD(P)H quinone oxidoreductase
scnpilot_solids2_trim150_scaffold_1373_curated_4
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1870..2217)
DNA (348bp) protein (116aa)
NAD(P)H quinone oxidoreductase, PIG3 family {ECO:0000313|EMBL:EFK56732.1}; EC=1.6.5.5 {ECO:0000313|EMBL:EFK56732.1};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
NAD(P)H quinone oxidoreductase, PIG3 family n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VSI1_9SPHI
PIG3 family NAD(P)H quinone oxidoreductase
scnpilot_solids2_trim150_scaffold_1373_curated_5
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2376..3104
DNA (729bp) protein (243aa)
Putative Pirin family protein n=2 Tax=Elizabethkingia anophelis RepID=H0KNC6_9FLAO
Pirin {ECO:0000313|EMBL:KFC38572.1}; TaxID=238 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica (Chryseobacterium meningosepticum).;"
protein yhhW; K06911
scnpilot_solids2_trim150_scaffold_1373_curated_6
unknown

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3550..4041
DNA (492bp) protein (164aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1373_curated_7
unknown

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4078..4617
DNA (540bp) protein (180aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1373_curated_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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4915..6468
DNA (1554bp) protein (518aa)
Signal transduction histidine kinase, LytS n=1 Tax=Niabella soli DSM 19437 RepID=H1NTJ6_9SPHI
putative signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1373_curated_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6465..7214
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035ED672
Chemotaxis protein CheY {ECO:0000313|EMBL:AHF16146.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
LytTR family transcriptional regulator; K02477 two-component system, LytT family, response regulator
scnpilot_solids2_trim150_scaffold_1373_curated_10
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7300..9552)
DNA (2253bp) protein (751aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X2Q2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05742.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1373_curated_11
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9799..11832
DNA (2034bp) protein (678aa)
Putative metalloendopeptidase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KNW7_SOLCM
putative metalloendopeptidase
Putative metalloendopeptidase {ECO:0000313|EMBL:AFD05378.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_1373_curated_12
unknown

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11915..12742
DNA (828bp) protein (276aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1373_curated_13
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12849..13286)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003724A5D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM71672.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
scnpilot_solids2_trim150_scaffold_1373_curated_14
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13515..14525)
DNA (1011bp) protein (337aa)
Luciferase family oxidoreductase, group 1 n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YTE3_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:KJJ40117.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
luciferase family oxidoreductase
scnpilot_solids2_trim150_scaffold_1373_curated_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14654..15322)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC23_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97014.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1373_curated_16
Alistipes sp. CAG:435, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15577..15909
DNA (333bp) protein (111aa)
Secreted protein n=1 Tax=Alistipes sp. CAG:435 RepID=R6XG05_9BACT
Secreted protein {ECO:0000313|EMBL:CDD15276.1}; TaxID=1262695 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:435.;"
secreted protein
scnpilot_solids2_trim150_scaffold_1373_curated_17
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15975..17075
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003695494
Contig28, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77886.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1373_curated_18
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17134..18033
DNA (900bp) protein (300aa)
PLP-dependent enzyme, glutamate decarboxylase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R268_OWEHD
PLP-dependent enzyme, glutamate decarboxylase
PLP-dependent enzyme, glutamate decarboxylase {ECO:0000313|EMBL:AEV31818.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
Displaying 18 items

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