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scnpilot_solids2_trim150_scaffold_749_curated

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_749_curated_1
unknown

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3..257
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_749_curated_2

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498..1556
DNA (1059bp) protein (353aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos23H9 RepID=Q64CG5_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU82912.1}; TaxID=285391 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos23H9.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_749_curated_3
unknown

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1753..2355
DNA (603bp) protein (201aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_749_curated_4
unknown

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2360..2848
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_749_curated_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2862..5237
DNA (2376bp) protein (792aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TC19_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99312.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_749_curated_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5410..5913)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Y4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01328.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_749_curated_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6360..6944
DNA (585bp) protein (195aa)
Transcriptional regulator, AraC family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W467_9FLAO
AraC family transcriptional regulator {ECO:0000313|EMBL:KIC93202.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_749_curated_8
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7109..8128
DNA (1020bp) protein (340aa)
Isopentenyl-diphosphate Delta-isomerase (EC:5.3.3.2); K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2]
Isopentenyl-diphosphate Delta-isomerase {ECO:0000313|EMBL:AEA45193.1}; EC=5.3.3.2 {ECO:0000313|EMBL:AEA45193.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9L2_FLUTR
scnpilot_solids2_trim150_scaffold_749_curated_9
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8133..9470
DNA (1338bp) protein (446aa)
hydroxymethylglutaryl-CoA reductase (EC:1.1.1.88); K00054 hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.88 {ECO:0000256|RuleBase:RU361219};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Hydroxymethylglutaryl-CoA reductase, degradative n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9L1_FLUTR
scnpilot_solids2_trim150_scaffold_749_curated_10
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9478..10368
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9L0_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45191.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_749_curated_11
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10379..11404
DNA (1026bp) protein (342aa)
diphosphomevalonate decarboxylase; K01597 diphosphomevalonate decarboxylase [EC:4.1.1.33]
Diphosphomevalonate decarboxylase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9K9_FLUTR
Diphosphomevalonate decarboxylase {ECO:0000313|EMBL:AEA45190.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_749_curated_12
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11411..12346
DNA (936bp) protein (312aa)
GHMP kinase; K00869 mevalonate kinase [EC:2.7.1.36]
GHMP kinase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9K8_FLUTR
GHMP kinase {ECO:0000313|EMBL:AEA45189.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_749_curated_13
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


12582..13028
DNA (447bp) protein (149aa)
50S ribosomal protein L11 n=1 Tax=Niabella aurantiaca RepID=UPI000372BDFE
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
scnpilot_solids2_trim150_scaffold_749_curated_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


13063..13752
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG3_CHIPD
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
scnpilot_solids2_trim150_scaffold_749_curated_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


13797..14303
DNA (507bp) protein (169aa)
50S ribosomal protein L10 n=1 Tax=Niabella aurantiaca RepID=UPI0003612CAB
50S ribosomal protein L10 {ECO:0000256|RuleBase:RU003636, ECO:0000256|SAAS:SAAS00104918}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
scnpilot_solids2_trim150_scaffold_749_curated_16
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


14470..14844
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG5_CHIPD
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_749_curated_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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15061..16836
DNA (1776bp) protein (592aa)
DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
DNA polymerase III subunit gamma/tau n=1 Tax=Niabella aurantiaca RepID=UPI00037F3504
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_749_curated_18
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16848..16940
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2JET0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ61173.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
TonB-dependent receptor plug
scnpilot_solids2_trim150_scaffold_749_curated_19
unknown

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16986..20129
DNA (3144bp) protein (1048aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_749_curated_20
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20149..21648
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000373B6CF
RagB/SusD domain-containing protein {ECO:0000313|EMBL:KGE14111.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
RagB/SusD domain-containing protein
scnpilot_solids2_trim150_scaffold_749_curated_21
unknown

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21670..22503
DNA (834bp) protein (278aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_749_curated_22
unknown

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comp(22523..22636)
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_749_curated_23
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22633..23649)
DNA (1017bp) protein (339aa)
Oxidoreductase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYH6_HALH1
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AEE49417.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_749_curated_24
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23775..25013)
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Clostridium arbusti RepID=UPI0002887FF7
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
scnpilot_solids2_trim150_scaffold_749_curated_25
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25073..26461)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035FCAE1
amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_solids2_trim150_scaffold_749_curated_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26567..26848
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDH1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00421.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 26 items

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