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scnpilot_solids2_trim150_scaffold_2430_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2430_curated_1
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2..379
DNA (378bp) protein (126aa)
Restriction endonuclease BglII id=4636717 bin=GWF2_Ignavibacteria_35_20 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
restriction endonuclease BglII
Tax=CG_Ignavi_02
scnpilot_solids2_trim150_scaffold_2430_curated_2
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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519..1475
DNA (957bp) protein (319aa)
Alpha/beta hydrolase n=1 Tax=Flavobacterium sp. F52 RepID=J0RLM8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KJJ39951.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
alpha/beta hydrolase; K07019
scnpilot_solids2_trim150_scaffold_2430_curated_3
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1468..1719)
DNA (252bp) protein (84aa)
Rhodanese-like domain protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VA58_9BACT
Rhodanese-like domain protein {ECO:0000313|EMBL:EPR67115.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
rhodanese-like protein
scnpilot_solids2_trim150_scaffold_2430_curated_4
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1736..3067)
DNA (1332bp) protein (444aa)
Metallo-beta-lactamase/rhodanese-like domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHS0_FLUTR
metallo-beta-lactamase/rhodanese-like domain-containing protein
Metallo-beta-lactamase/rhodanese-like domain-containing protein {ECO:0000313|EMBL:AEA44848.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_2430_curated_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3327..4847
DNA (1521bp) protein (507aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMH6_NIAKG
scnpilot_solids2_trim150_scaffold_2430_curated_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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4847..5971
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003789498
alkyl hydroperoxide reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_2430_curated_7
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6281..7432
DNA (1152bp) protein (384aa)
Major facilitator superfamily MFS_1 n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5J0_SPHS2
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADZ79647.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids2_trim150_scaffold_2430_curated_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(7434..8177)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003658536
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_2430_curated_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8251..9768)
DNA (1518bp) protein (506aa)
GH3 auxin-responsive promoter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V0_NIAKG
GH3 auxin-responsive promoter
GH3 auxin-responsive promoter {ECO:0000313|EMBL:AEW02307.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_2430_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9874..10644)
DNA (771bp) protein (257aa)
sulfate-transporting ATPase; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-]
Sulfate-transporting ATPase n=1 Tax=Niabella soli DSM 19437 RepID=H1NT07_9SPHI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF16093.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_solids2_trim150_scaffold_2430_curated_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10756..12255)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNC5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98827.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_2430_curated_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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12468..12977
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036856E8
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_2430_curated_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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12984..13991
DNA (1008bp) protein (336aa)
oligoendopeptidase; K08602 oligoendopeptidase F [EC:3.4.24.-]
oligoendopeptidase F n=1 Tax=Segetibacter koreensis RepID=UPI0003812FFB
Oligoendopeptidase, M3 family {ECO:0000313|EMBL:AEW02527.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 13 items

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