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scnpilot_solids2_trim150_scaffold_1696_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1696_curated_1
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1..549)
DNA (549bp) protein (183aa)
Aminoglycoside phosphotransferase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S5Q3_PEDSD
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ADY54227.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_1696_curated_2
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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654..1568
DNA (915bp) protein (305aa)
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
Dihydrodipicolinate synthase {ECO:0000313|EMBL:AEE49111.1}; EC=4.3.3.7 {ECO:0000313|EMBL:AEE49111.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Dihydrodipicolinate synthase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KTX5_HALH1
scnpilot_solids2_trim150_scaffold_1696_curated_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1572..3047
DNA (1476bp) protein (492aa)
aldehyde dehydrogenase; K14519 NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4]
Aldehyde dehydrogenase (NADP(+)) {ECO:0000313|EMBL:AEV98916.1}; EC=1.2.1.4 {ECO:0000313|EMBL:AEV98916.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aldehyde dehydrogenase (NADP(+)) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPT3_NIAKG
scnpilot_solids2_trim150_scaffold_1696_curated_4

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comp(3367..3762)
DNA (396bp) protein (132aa)
Thioredoxin n=1 Tax=uncultured bacterium RepID=K1Y135_9BACT
Thioredoxin {ECO:0000313|EMBL:EKD31127.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
thioredoxin
scnpilot_solids2_trim150_scaffold_1696_curated_5
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3851..4711)
DNA (861bp) protein (287aa)
Transcriptional regulator, AraC family n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EY50_EMTOG
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AFK04603.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids2_trim150_scaffold_1696_curated_6
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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4819..6423
DNA (1605bp) protein (535aa)
alpha amylase (EC:3.2.1.1)
Alpha amylase id=4591405 bin=GWA2_Flavobacterium_35_26 species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
Tax=GWD1_Spirochaetes_27_9_curated
scnpilot_solids2_trim150_scaffold_1696_curated_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6428..8746
DNA (2319bp) protein (773aa)
Family 31 glycosyl hydrolase, alpha-glucosidase {ECO:0000313|EMBL:CDM64386.1}; EC=3.2.1.177 {ECO:0000313|EMBL:CDM64386.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
alpha-glucosidase; K01811 alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
Alpha-glucosidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFY9_RHOM4
scnpilot_solids2_trim150_scaffold_1696_curated_8
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8775..9596
DNA (822bp) protein (274aa)
phytanoyl-CoA dioxygenase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B786E6
Uncharacterized protein {ECO:0000313|EMBL:ETZ23150.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
phytanoyl-CoA dioxygenase
scnpilot_solids2_trim150_scaffold_1696_curated_9
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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9602..10717
DNA (1116bp) protein (372aa)
alcohol dehydrogenase groes domain protein; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
histidine kinase n=1 Tax=Echinicola pacifica RepID=UPI00037E4D3D
Putative alcohol dehydrogenase {ECO:0000313|EMBL:AHM61140.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
scnpilot_solids2_trim150_scaffold_1696_curated_10
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10714..11511
DNA (798bp) protein (266aa)
carbohydrate esterase (EC:3.1.1.-)
Carbohydrate esterase, family CE1 {ECO:0000313|EMBL:CAZ98808.1}; EC=3.1.1.- {ECO:0000313|EMBL:CAZ98808.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
hypothetical protein n=1 Tax=Eudoraea adriatica RepID=UPI00036DF8F6
scnpilot_solids2_trim150_scaffold_1696_curated_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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11612..12799
DNA (1188bp) protein (396aa)
Lactate 2-monooxygenase {ECO:0000313|EMBL:ACY48353.1}; EC=1.13.12.4 {ECO:0000313|EMBL:ACY48353.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
Lactate 2-monooxygenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIP5_RHOM4
Lactate 2-monooxygenase
scnpilot_solids2_trim150_scaffold_1696_curated_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(13003..14430)
DNA (1428bp) protein (476aa)
coagulation factor 5/8 type domain-containing protein; K01206 alpha-L-fucosidase [EC:3.2.1.51]
Coagulation factor 5/8 type domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM57_CHIPD
Putative alpha-L-fucosidase {ECO:0000313|EMBL:GAO42010.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids2_trim150_scaffold_1696_curated_13
unknown

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14473..14604
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1696_curated_14
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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14729..16717
DNA (1989bp) protein (663aa)
sulfatase n=1 Tax=Empedobacter brevis RepID=UPI00036E5571
Sulfatase {ECO:0000313|EMBL:KFC17864.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
sulfatase
scnpilot_solids2_trim150_scaffold_1696_curated_15
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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16786..17397
DNA (612bp) protein (204aa)
PAP2 family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2S2_9FLAO
PA-phosphatase {ECO:0000313|EMBL:KFF22376.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
phosphoesterase PA-phosphatase-like protein
Displaying 15 items

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