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scnpilot_solids2_trim150_scaffold_1695_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1695_curated_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..1405)
DNA (1404bp) protein (468aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15]
Proline--tRNA ligase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEG1_CHIPD
scnpilot_solids2_trim150_scaffold_1695_curated_2
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1578..2522
DNA (945bp) protein (315aa)
Uncharacterized protein {ECO:0000313|EMBL:AKD55703.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_solids2_trim150_scaffold_1695_curated_3
unknown

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2548..2649
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1695_curated_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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2610..4154
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036EC8FB
aromatic hydrocarbon degradation membrane protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1695_curated_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4189..5223)
DNA (1035bp) protein (345aa)
UPF0176 protein Niako_1543 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6Q9_NIAKG
UPF0176 protein OI18_08945 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein; K07146 UPF0176 protein
scnpilot_solids2_trim150_scaffold_1695_curated_6
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6163..6822
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029B52BE
Uncharacterized protein {ECO:0000313|EMBL:KIA96667.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1695_curated_7
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6904..8082
DNA (1179bp) protein (393aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
nicotinate phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11]
Nicotinate phosphoribosyltransferase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5F3_SPHS2
scnpilot_solids2_trim150_scaffold_1695_curated_8
unknown

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comp(8096..8761)
DNA (666bp) protein (222aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1695_curated_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8773..10422)
DNA (1650bp) protein (550aa)
sodium:solute symporter n=1 Tax=Niabella aurantiaca RepID=UPI00037DF0AD
Sodium:solute symporter {ECO:0000313|EMBL:KIC93321.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SSS sodium solute transporter superfamily
scnpilot_solids2_trim150_scaffold_1695_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10551..12980)
DNA (2430bp) protein (810aa)
LmbE family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLN4_9SPHI
GlcNAc-PI de-N-acetylase {ECO:0000313|EMBL:AHF14586.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
LmbE family protein
scnpilot_solids2_trim150_scaffold_1695_curated_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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13189..13686
DNA (498bp) protein (166aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
purine nucleoside phosphorylase; K03783 purine-nucleoside phosphorylase [EC:2.4.2.1]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035CA850
Displaying 11 items

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