ggKbase home page

scnpilot_solids2_trim150_scaffold_4331_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4331_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..775
DNA (774bp) protein (258aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI000378FD05
Dehydrogenase {ECO:0000313|EMBL:AHF15264.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_solids2_trim150_scaffold_4331_curated_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

800..1384
DNA (585bp) protein (195aa)
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003749ADD
scnpilot_solids2_trim150_scaffold_4331_curated_3
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1377..1859
DNA (483bp) protein (161aa)
nucleotidyltransferase; K15669 D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X070_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03765.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_solids2_trim150_scaffold_4331_curated_4
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1941..2351
DNA (411bp) protein (137aa)
Thioredoxin n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZUD3_9BACT
Thioredoxin {ECO:0000313|EMBL:EON77638.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
rhodanese-like protein
scnpilot_solids2_trim150_scaffold_4331_curated_5
unknown

Not on your lists

comp(2429..2980)
DNA (552bp) protein (184aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4331_curated_6
unknown

Not on your lists

3675..3815
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4331_curated_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3821..4495
DNA (675bp) protein (225aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Niabella soli DSM 19437 RepID=H1NQ25_9SPHI
Transcriptional regulator {ECO:0000313|EMBL:KIC90282.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
winged helix family two component transcriptional regulator
scnpilot_solids2_trim150_scaffold_4331_curated_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4492..5802
DNA (1311bp) protein (437aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NQ24_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17727.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_4331_curated_9
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5865..8378)
DNA (2514bp) protein (838aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KHA2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH03505.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_solids2_trim150_scaffold_4331_curated_10
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8430..9413)
DNA (984bp) protein (328aa)
arabinogalactan endo-1,4-beta-galactosidase; K01224 arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Arabinogalactan endo-1,4-beta-galactosidase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L019_HALH1
Displaying 10 items

View Taxonomy