ggKbase home page

scnpilot_solids2_trim150_scaffold_1323_curated

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1323_curated_1
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..2264)
DNA (2262bp) protein (754aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE64_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:GAO43712.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1323_curated_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2305..3831)
DNA (1527bp) protein (509aa)
YjeF-related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAL0_NIAKG
hypothetical protein
YjeF-related protein {ECO:0000313|EMBL:AEV98172.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1323_curated_3
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3850..4362)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361507F
hypothetical protein
Tax=RBG_16_Ignavibacteria_36_9_curated
scnpilot_solids2_trim150_scaffold_1323_curated_4
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4591..5406
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003668E87
Uncharacterized protein {ECO:0000313|EMBL:GAO41235.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1323_curated_5
unknown

Not on your lists

5499..6224
DNA (726bp) protein (242aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1323_curated_6
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6395..8071
DNA (1677bp) protein (559aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000376F6EB
peptidase S8 and S53 subtilisin kexin sedolisin
Tax=GWE2_Bacteroidetes_32_14_curated
scnpilot_solids2_trim150_scaffold_1323_curated_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8076..9149)
DNA (1074bp) protein (358aa)
Fmu (Sun) domain-containing protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D7EF4
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1323_curated_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9262..10569)
DNA (1308bp) protein (436aa)
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9T7_NIAKG
scnpilot_solids2_trim150_scaffold_1323_curated_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10625..13420)
DNA (2796bp) protein (932aa)
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:AEW01280.1}; EC=1.2.4.2 {ECO:0000313|EMBL:AEW01280.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9T6_NIAKG
scnpilot_solids2_trim150_scaffold_1323_curated_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


13695..13952
DNA (258bp) protein (86aa)
30S ribosomal protein S20 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9T5_NIAKG
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1323_curated_11
unknown

Not on your lists

comp(14008..14136)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1323_curated_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14187..15887
DNA (1701bp) protein (567aa)
Peptidase M14 carboxypeptidase A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9T4_NIAKG
peptidase M14 carboxypeptidase A
Peptidase M14 carboxypeptidase A {ECO:0000313|EMBL:AEW01278.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1323_curated_13
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

16010..17116
DNA (1107bp) protein (369aa)
Nucleoside transporter id=1898062 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
nucleoside transporter; K11537 MFS transporter, NHS family, xanthosine permease
Tax=CG_Bacteroid_01
scnpilot_solids2_trim150_scaffold_1323_curated_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17266..19764
DNA (2499bp) protein (833aa)
TonB-dependent receptor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPE2_NIAKG
TonB-dependent receptor {ECO:0000313|EMBL:AEV96748.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
TonB-dependent receptor
scnpilot_solids2_trim150_scaffold_1323_curated_15
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

19777..20898
DNA (1122bp) protein (374aa)
tfdD; mandelate racemase/muconate lactonizing family protein (EC:5.5.1.7)
Muconate cycloisomerase id=2280726 bin=GWB2_Clostridiales_37_7 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
Tax=GWB2_Clostridiales_37_7_curated
scnpilot_solids2_trim150_scaffold_1323_curated_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20956..21723
DNA (768bp) protein (256aa)
Cellulase n=1 Tax=Niabella soli DSM 19437 RepID=H1NV13_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16298.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
cellulase
scnpilot_solids2_trim150_scaffold_1323_curated_17
unknown

Not on your lists

comp(22155..22382)
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1323_curated_18
unknown

Not on your lists

comp(22507..22629)
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1323_curated_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22720..23916
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036629FB
major facilitator transporter; K08178 MFS transporter, SHS family, lactate transporter
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
scnpilot_solids2_trim150_scaffold_1323_curated_20
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24187..26616)
DNA (2430bp) protein (810aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1]
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W448_9FLAO
scnpilot_solids2_trim150_scaffold_1323_curated_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27216..27908)
DNA (693bp) protein (231aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCE0_NIAKG
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:AEW01447.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1323_curated_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(28010..28939)
DNA (930bp) protein (310aa)
phosphoenolpyruvate carboxykinase; K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH96_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 22 items

View Taxonomy