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scnpilot_solids2_trim150_scaffold_1321_curated

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1321_curated_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(50..667)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI52_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00669.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1321_curated_2
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(790..1593)
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11TX0_CYTH3
Uncharacterized protein {ECO:0000313|EMBL:AKD57751.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1321_curated_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1823..3463)
DNA (1641bp) protein (547aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003741EAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00670.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1321_curated_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3474..6506)
DNA (3033bp) protein (1011aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003682004
hypothetical protein
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:AEW00671.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1321_curated_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6654..7061
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000365F3F9
Uncharacterized protein {ECO:0000313|EMBL:KIC90219.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
DoxX family protein; K15977 putative oxidoreductase
scnpilot_solids2_trim150_scaffold_1321_curated_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7065..7484
DNA (420bp) protein (140aa)
4-hydroxybenzoyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
thioesterase n=1 Tax=Niabella aurantiaca RepID=UPI000378C617
Putative acyl-CoA thioesterase {ECO:0000313|EMBL:GAO44280.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids2_trim150_scaffold_1321_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7713..8489
DNA (777bp) protein (259aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
pyrroline-5-carboxylate reductase; K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036E9F2E
scnpilot_solids2_trim150_scaffold_1321_curated_8
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8664..9626)
DNA (963bp) protein (321aa)
alcohol dehydrogenase n=1 Tax=Myroides injenensis RepID=UPI000288E0D1
Alcohol dehydrogenase {ECO:0000313|EMBL:KFF04602.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
alcohol dehydrogenase
scnpilot_solids2_trim150_scaffold_1321_curated_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9700..10833)
DNA (1134bp) protein (378aa)
Glycosyl transferase family 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH86_NIAKG
Putative glycosyltransferase {ECO:0000313|EMBL:GAO41279.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
family 2 glycosyl transferase
scnpilot_solids2_trim150_scaffold_1321_curated_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11092..11712)
DNA (621bp) protein (207aa)
16S rRNA m(7)G-527 methyltransferase; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000376CB39
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1321_curated_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11786..12925
DNA (1140bp) protein (380aa)
tRNA-guanine transglycosylase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Queuine tRNA-ribosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH85_NIAKG
scnpilot_solids2_trim150_scaffold_1321_curated_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12920..13858)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370765B
Uncharacterized protein {ECO:0000313|EMBL:KIC93860.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1321_curated_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13919..14467)
DNA (549bp) protein (183aa)
histidinol-phosphate phosphatase family protein; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPQ7_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1321_curated_14
unknown

Not on your lists

comp(14477..14599)
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1321_curated_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14667..15989
DNA (1323bp) protein (441aa)
citrate (Si)-synthase; K01647 citrate synthase [EC:2.3.3.1]
Citrate (Si)-synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH82_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1321_curated_16
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16187..16402)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CVV1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIN00020.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1321_curated_17
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16428..16997
DNA (570bp) protein (190aa)
Beta-galactosidase/beta-glucuronidase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUA9_SOLCM
beta-galactosidase/beta-glucuronidase
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:AFD07221.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_1321_curated_18
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16987..18417
DNA (1431bp) protein (477aa)
Beta-galactosidase/beta-glucuronidase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUA9_SOLCM
beta-galactosidase/beta-glucuronidase
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:AFD07221.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_1321_curated_19
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18586..19419)
DNA (834bp) protein (278aa)
small mechanosensitive ion channel protein MscS n=1 Tax=Myroides injenensis RepID=UPI000289FEA4
Small conductance mechanosensitive channel {ECO:0000313|EMBL:AJH16531.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
mechanosensitive ion channel MscS; K03442 small conductance mechanosensitive channel
scnpilot_solids2_trim150_scaffold_1321_curated_20
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19662..20384
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BHR9_9BACT
Putative 3'-5' exonuclease related to the exonuclease domain of PolB {ECO:0000313|EMBL:GAF01769.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
3'-5' exonuclease, DnaQ_like_exo superfamily
scnpilot_solids2_trim150_scaffold_1321_curated_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20611..21084)
DNA (474bp) protein (158aa)
DNA mismatch repair protein MutS n=1 Tax=Segetibacter koreensis RepID=UPI00036CA2A1
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1321_curated_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21105..22931)
DNA (1827bp) protein (609aa)
DNA mismatch repair protein MutS n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI79_NIAKG
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1321_curated_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23006..23548
DNA (543bp) protein (181aa)
RNA methyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI0003804E78
RNA methyltransferase {ECO:0000313|EMBL:AHF15201.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
tRNA/rRNA methyltransferase SpoU
scnpilot_solids2_trim150_scaffold_1321_curated_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23552..23965
DNA (414bp) protein (138aa)
Holliday junction resolvase; K07447 putative holliday junction resolvase [EC:3.1.-.-]
Putative Holliday junction resolvase n=1 Tax=Niabella soli DSM 19437 RepID=H1NNS4_9SPHI
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1321_curated_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24002..25774)
DNA (1773bp) protein (591aa)
MFS transporter n=1 Tax=Rudanella lutea RepID=UPI00036ED03D
major facilitator transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1321_curated_26
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25919..26281
DNA (363bp) protein (121aa)
transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI000363669F
Transcriptional regulator {ECO:0000313|EMBL:AHF14665.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
CopY family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1321_curated_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

26286..28388
DNA (2103bp) protein (701aa)
Uncharacterized protein n=2 Tax=Elizabethkingia anophelis RepID=L8KBV7_9FLAO
peptidase M56 BlaR1
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1321_curated_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28545..29390)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003621004
6-phosphogluconate dehydrogenase
6-phosphogluconate dehydrogenase NAD-binding protein {ECO:0000313|EMBL:AEW02382.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 28 items

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