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scnpilot_solids2_trim150_scaffold_1638_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1638_curated_1
unknown

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comp(2..94)
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1638_curated_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(323..2722)
DNA (2400bp) protein (800aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
anti-sigma H sporulation factor LonB; K01338 ATP-dependent Lon protease [EC:3.4.21.53]
Lon protease n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPZ0_NIAKG
scnpilot_solids2_trim150_scaffold_1638_curated_3
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3022..3309
DNA (288bp) protein (96aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W519_9FLAO
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EFK35208.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
alpha/beta hydrolase fold protein
scnpilot_solids2_trim150_scaffold_1638_curated_4
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3306..3824
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C12C3
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEI51764.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_1638_curated_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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4020..6926
DNA (2907bp) protein (969aa)
excinuclease ABC subunit A n=1 Tax=Segetibacter koreensis RepID=UPI000380332E
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1638_curated_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7105..8088)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK93_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO44840.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1638_curated_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8174..8638)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BA8A9
Uncharacterized protein {ECO:0000313|EMBL:KIC90731.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
elaA; ElaA protein; K02348 ElaA protein
scnpilot_solids2_trim150_scaffold_1638_curated_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8665..10905)
DNA (2241bp) protein (747aa)
(p)ppGpp synthetase I SpoT/RelA; K00951 GTP pyrophosphokinase [EC:2.7.6.5]
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJT8_NIAKG
MFS transporter {ECO:0000313|EMBL:KIC92908.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_1638_curated_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11220..12590
DNA (1371bp) protein (457aa)
trigger factor n=1 Tax=Niabella aurantiaca RepID=UPI00036A4FDF
Trigger factor {ECO:0000313|EMBL:KIC92858.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
trigger factor; K03545 trigger factor
scnpilot_solids2_trim150_scaffold_1638_curated_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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12690..13382
DNA (693bp) protein (231aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
ATP-dependent Clp protease proteolytic subunit ClpP; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease ClpP n=1 Tax=Segetibacter koreensis RepID=UPI00037A5DF3
scnpilot_solids2_trim150_scaffold_1638_curated_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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13384..14022
DNA (639bp) protein (213aa)
ATP-dependent Clp protease proteolytic subunit; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQE7_NIAKG
scnpilot_solids2_trim150_scaffold_1638_curated_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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14078..15313
DNA (1236bp) protein (412aa)
ATPase AAA n=1 Tax=Segetibacter koreensis RepID=UPI000368A089
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX
scnpilot_solids2_trim150_scaffold_1638_curated_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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15406..16671
DNA (1266bp) protein (422aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
adenylosuccinate synthetase; K01939 adenylosuccinate synthase [EC:6.3.4.4]
Adenylosuccinate synthetase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJT7_NIAKG
scnpilot_solids2_trim150_scaffold_1638_curated_14
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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16776..17198
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSK1_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64450.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_1638_curated_15
unknown

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comp(17279..17413)
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 15 items

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