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scnpilot_solids2_trim150_scaffold_3182_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3182_curated_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..669
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ4_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91985.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3182_curated_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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681..1502
DNA (822bp) protein (274aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ5_NIAKG
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEW01342.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_3182_curated_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1548..2204
DNA (657bp) protein (219aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ6_NIAKG
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIC91984.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
two component transcriptional regulator, LuxR family
scnpilot_solids2_trim150_scaffold_3182_curated_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2219..2659)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB00_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01347.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_3182_curated_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2656..3573)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F8AC1
Uncharacterized protein {ECO:0000313|EMBL:KIC89390.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3182_curated_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3570..4757)
DNA (1188bp) protein (396aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5]
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000367035E
Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:KIC91978.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_3182_curated_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4857..5198)
DNA (342bp) protein (114aa)
DNA-directed RNA polymerase subunit omega n=1 Tax=Segetibacter koreensis RepID=UPI000382E9B0
DNA-directed RNA polymerase subunit omega {ECO:0000313|EMBL:KIC89392.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
DNA-directed RNA polymerase subunit omega
scnpilot_solids2_trim150_scaffold_3182_curated_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5167..5991)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035E7F35
Membrane protein {ECO:0000313|EMBL:KIC89393.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein
scnpilot_solids2_trim150_scaffold_3182_curated_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6144..7562)
DNA (1419bp) protein (473aa)
OmpA/MotB domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB05_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC89394.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
OmpA/MotB domain-containing protein
scnpilot_solids2_trim150_scaffold_3182_curated_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7925..8887
DNA (963bp) protein (321aa)
trans-hexaprenyltranstransferase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90]
Trans-hexaprenyltranstransferase {ECO:0000313|EMBL:ACU64389.1}; EC=2.5.1.30 {ECO:0000313|EMBL:ACU64389.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Trans-hexaprenyltranstransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRF0_CHIPD
scnpilot_solids2_trim150_scaffold_3182_curated_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8912..10624
DNA (1713bp) protein (571aa)
exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Exonuclease RecJ {ECO:0000313|EMBL:AEW01354.1}; EC=3.1.-.- {ECO:0000313|EMBL:AEW01354.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037EE6FC
scnpilot_solids2_trim150_scaffold_3182_curated_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10631..11323
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7P9Y3_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59220.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_3182_curated_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(11353..11610)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000376A1F2
Heat shock protein Hsp90; K04079 molecular chaperone HtpG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_3182_curated_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11567..13153)
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000376A1F2
Molecular chaperone Hsp90 {ECO:0000313|EMBL:KIC91990.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Heat shock protein Hsp90; K04079 molecular chaperone HtpG
scnpilot_solids2_trim150_scaffold_3182_curated_15
Nonlabens marinus, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(13341..15365)
DNA (2025bp) protein (675aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037CBEF8
Uncharacterized protein {ECO:0000313|EMBL:BAO54215.1}; TaxID=1454201 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens marinus S1-08.;"
hypothetical protein
Displaying 15 items

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