ggKbase home page

scnpilot_solids2_trim150_scaffold_4085_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4085_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..439)
DNA (438bp) protein (146aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
deoxyribose-phosphate aldolase; K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4]
Deoxyribose-phosphate aldolase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPJ3_9SPHI
scnpilot_solids2_trim150_scaffold_4085_curated_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

514..3627
DNA (3114bp) protein (1038aa)
Amidohydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLI7_NIAKG
Amidohydrolase {ECO:0000313|EMBL:AEV96556.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
amidohydrolase
scnpilot_solids2_trim150_scaffold_4085_curated_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3791..4837
DNA (1047bp) protein (349aa)
Amidohydrolase 3 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLI8_NIAKG
Putative hydrolase {ECO:0000313|EMBL:GAO44802.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
amidohydrolase
scnpilot_solids2_trim150_scaffold_4085_curated_4
unknown

Not on your lists

5177..5296
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4085_curated_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5844..6509
DNA (666bp) protein (222aa)
Putative O-methyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NKJ4_9SPHI
Macrocin-O-methyltransferase TylF {ECO:0000313|EMBL:AHF16894.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
O-methyltransferase
scnpilot_solids2_trim150_scaffold_4085_curated_6
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6814..7713
DNA (900bp) protein (300aa)
Metallo-beta-lactamase protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FS91_9FLAO
Metallo-beta-lactamase protein {ECO:0000313|EMBL:EIA08588.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
beta-lactamase
scnpilot_solids2_trim150_scaffold_4085_curated_7
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7765..8220
DNA (456bp) protein (152aa)
Diamine acetyltransferase n=1 Tax=Galbibacter marinus RepID=K2QH63_9FLAO
Diamine acetyltransferase {ECO:0000313|EMBL:EKF54087.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
diamine acetyltransferase
scnpilot_solids2_trim150_scaffold_4085_curated_8
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

comp(8255..9448)
DNA (1194bp) protein (398aa)
hypothetical protein
Uncharacterized protein id=2020504 bin=GWE2_Bacteroidetes_42_42 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
Tax=GWF2_Bacteroidetes_43_63_curated
scnpilot_solids2_trim150_scaffold_4085_curated_9
unknown

Not on your lists

comp(9496..10659)
DNA (1164bp) protein (388aa)

This feature has no annotations

Displaying 9 items

View Taxonomy