ggKbase home page

scnpilot_solids2_trim150_scaffold_2040_curated

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2040_curated_1
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1..327)
DNA (327bp) protein (109aa)
Restriction endonuclease BglII id=4636717 bin=GWF2_Ignavibacteria_35_20 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
restriction endonuclease BglII
Tax=CG_Ignavi_02
scnpilot_solids2_trim150_scaffold_2040_curated_2
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(324..1292)
DNA (969bp) protein (323aa)
DNA (Cytosine-5-)-methyltransferase id=2249458 bin=GWB2_Bacteroidetes_32_14 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
DNA (cytosine-5-)-methyltransferase
Tax=GWD2_Bacteroidetes_33_33_curated
scnpilot_solids2_trim150_scaffold_2040_curated_3
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1529..2758)
DNA (1230bp) protein (410aa)
Major facilitator superfamily (MFS) transport protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GM73_9SPHI
Major facilitator superfamily (MFS) transport protein {ECO:0000313|EMBL:EOR92937.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
major facilitator superfamily protein
scnpilot_solids2_trim150_scaffold_2040_curated_4
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2908..5256)
DNA (2349bp) protein (783aa)
MscS Mechanosensitive ion channel n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C3J7_SPHS2
Mechanosensitive ion channel protein {ECO:0000313|EMBL:KIA95246.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
mechanosensitive ion channel MscS
scnpilot_solids2_trim150_scaffold_2040_curated_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5409..7859)
DNA (2451bp) protein (817aa)
Peptidase M1 membrane alanine aminopeptidase; K01256 aminopeptidase N [EC:3.4.11.2]
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB30_NIAKG
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:AEW01377.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_2040_curated_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7964..9655
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB29_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01376.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_2040_curated_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9659..10414
DNA (756bp) protein (252aa)
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
tRNA pseudouridine synthase A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB28_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_2040_curated_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10570..11220)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGY6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99588.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_2040_curated_9
unknown

Not on your lists

11280..11405
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2040_curated_10
unknown

Not on your lists

11417..11635
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2040_curated_11
unknown

Not on your lists

11832..11966
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 11 items

View Taxonomy