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scnpilot_solids2_trim150_scaffold_954_curated

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_954_curated_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1..1173
DNA (1173bp) protein (391aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
PpiC-type peptidyl-prolyl cis-trans isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003788883
scnpilot_solids2_trim150_scaffold_954_curated_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1664..3511
DNA (1848bp) protein (616aa)
Amidophosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14]
Amidophosphoribosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8W2_NIAKG
Amidophosphoribosyltransferase {ECO:0000313|EMBL:KIC96313.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_954_curated_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3527..4018
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374E5EE
Phosphohistidine phosphatase {ECO:0000313|EMBL:KIC90852.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
phosphohistidine phosphatase, SixA
scnpilot_solids2_trim150_scaffold_954_curated_4
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(4113..4724)
DNA (612bp) protein (204aa)
Conserved hypothetical cytosolic protein n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EDT2_CHLL2
hypothetical protein
Conserved hypothetical cytosolic protein {ECO:0000313|EMBL:ACD89162.1}; TaxID=290315 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium limicola (strain DSM 245 / NBRC 103803).;"
scnpilot_solids2_trim150_scaffold_954_curated_5
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4747..6000)
DNA (1254bp) protein (418aa)
DNA methylase N-4/N-6 domain protein id=5037359 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
DNA methylase N-4/N-6 domain-containing protein
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids2_trim150_scaffold_954_curated_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6158..7429)
DNA (1272bp) protein (424aa)
class I and II aminotransferase; K00812 aspartate aminotransferase [EC:2.6.1.1]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F67FB
Aminotransferase {ECO:0000313|EMBL:KIC96310.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_954_curated_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7486..9555)
DNA (2070bp) protein (690aa)
leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Leucine--tRNA ligase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ63_CHIPD
scnpilot_solids2_trim150_scaffold_954_curated_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10437..11315
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003609E29
cell division protein FtsX; K09811 cell division transport system permease protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_954_curated_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11350..11634
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000369B854
Uncharacterized protein {ECO:0000313|EMBL:KIC94522.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_954_curated_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11650..12441
DNA (792bp) protein (264aa)
UDP-diphosphatase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003625E1A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_954_curated_11
Acinetobacter sp. NIPH 3623, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12490..12930)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. NIPH 3623 RepID=N9Q180_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENX39508.1}; TaxID=1217698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 3623.;"
adenine specific DNA methyltransferase
scnpilot_solids2_trim150_scaffold_954_curated_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13076..14908)
DNA (1833bp) protein (611aa)
2-oxoacid:acceptor oxidoreductase subunit alpha; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
2-oxoacid:acceptor oxidoreductase, alpha subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIL5_NIAKG
2-oxoglutarate ferredoxin oxidoreductase subunit alpha {ECO:0000313|EMBL:KIC94740.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_954_curated_13
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15034..17169
DNA (2136bp) protein (712aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDR5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHM62109.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_954_curated_14
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17155..17979)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CNJ0_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EOR30882.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_954_curated_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18032..18811)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THE7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02793.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_954_curated_16
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18804..19946)
DNA (1143bp) protein (381aa)
Cystathionine gamma-lyase {ECO:0000313|EMBL:ACU57992.1}; EC=4.4.1.1 {ECO:0000313|EMBL:ACU57992.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Cystathionine gamma-lyase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG09_CHIPD
cystathionine gamma-synthase
scnpilot_solids2_trim150_scaffold_954_curated_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19966..20565)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THF2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02798.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_954_curated_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20555..21151)
DNA (597bp) protein (199aa)
Acyl carrier protein phosphodiesterase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THF3_NIAKG
Acyl carrier protein phosphodiesterase
Acyl carrier protein phosphodiesterase {ECO:0000313|EMBL:AEW02799.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_954_curated_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21314..22267
DNA (954bp) protein (318aa)
Aldose 1-epimerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIQ5_NIAKG
aldose 1-epimerase
Aldose 1-epimerase {ECO:0000313|EMBL:AEW02908.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_954_curated_20
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22272..23450
DNA (1179bp) protein (393aa)
galactokinase; K00849 galactokinase [EC:2.7.1.6]
Galactokinase n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IYF9_CYCMS
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids2_trim150_scaffold_954_curated_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23519..24730
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK29_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02967.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_954_curated_22
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24914..26029
DNA (1116bp) protein (372aa)
Beta-lactamase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QDZ8_SPILD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ADB41214.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_solids2_trim150_scaffold_954_curated_23
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26140..28335)
DNA (2196bp) protein (732aa)
peptidase S9B dipeptidylpeptidase IV domain-containing protein; K01278 dipeptidyl-peptidase 4 [EC:3.4.14.5]
Peptidase S9B dipeptidylpeptidase IV domain protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QK14_SPILD
Peptidase S9B dipeptidylpeptidase IV domain protein {ECO:0000313|EMBL:ADB37136.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_solids2_trim150_scaffold_954_curated_24
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28489..30084)
DNA (1596bp) protein (532aa)
major facilitator transporter n=1 Tax=Niabella aurantiaca RepID=UPI00037A86C5
Major facilitator transporter {ECO:0000313|EMBL:AHF15328.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
EmrB/QacA subfamily drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
scnpilot_solids2_trim150_scaffold_954_curated_25
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30103..31254)
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360B3CE
Putative multidrug efflux pump membrane fusion protein {ECO:0000313|EMBL:GAO41270.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
secretion protein HlyD family protein; K03543 multidrug resistance protein A
scnpilot_solids2_trim150_scaffold_954_curated_26
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31262..32569)
DNA (1308bp) protein (436aa)
Outer membrane efflux protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NN99_9SPHI
Transporter {ECO:0000313|EMBL:AHF15330.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
outer membrane efflux protein
scnpilot_solids2_trim150_scaffold_954_curated_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32571..33164)
DNA (594bp) protein (198aa)
transcriptional regulator n=1 Tax=Cytophagales str. B6 RepID=UPI0003B563D6
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEW02777.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_954_curated_28
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33415..34140)
DNA (726bp) protein (242aa)
Nitric oxide-dependent regulator n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M180_GRAFK
dnrN; nitric oxide-dependent regulator; K07322 regulator of cell morphogenesis and NO signaling
Nitric oxide-dependent regulator {ECO:0000313|EMBL:CAL66375.1}; TaxID=411154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gramella.;" source="Gramella forsetii (strain KT0803).;"
scnpilot_solids2_trim150_scaffold_954_curated_29
unknown

Not on your lists

34651..34803
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_954_curated_30
unknown

Not on your lists

35100..36047
DNA (948bp) protein (316aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

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