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scnpilot_solids2_trim150_scaffold_3295_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3295_curated_1
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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comp(3..266)
DNA (264bp) protein (88aa)
alcohol dehydrogenase; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
Alcohol dehydrogenase GroES domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPA4_9BACT
Tax=RBG_13_OP8X_37_8_curated
scnpilot_solids2_trim150_scaffold_3295_curated_2
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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623..1468
DNA (846bp) protein (282aa)
Tax=BJP_IG2069_Bacteroidetes_43_11
scnpilot_solids2_trim150_scaffold_3295_curated_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1687..2517)
DNA (831bp) protein (277aa)
elongation factor Ts n=1 Tax=Segetibacter koreensis RepID=UPI00036F2FFF
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
translation elongation factor Ts; K02357 elongation factor Ts
scnpilot_solids2_trim150_scaffold_3295_curated_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2575..3447)
DNA (873bp) protein (291aa)
30S ribosomal protein S2 n=1 Tax=Segetibacter koreensis RepID=UPI00035DEB64
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2
scnpilot_solids2_trim150_scaffold_3295_curated_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3505..3894)
DNA (390bp) protein (130aa)
30S ribosomal protein S9 n=1 Tax=Segetibacter koreensis RepID=UPI000376B685
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
scnpilot_solids2_trim150_scaffold_3295_curated_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3923..4375)
DNA (453bp) protein (151aa)
50S ribosomal protein L13 n=1 Tax=Segetibacter koreensis RepID=UPI000375B0E6
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
scnpilot_solids2_trim150_scaffold_3295_curated_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4743..5591
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCG6_NIAKG
hypothetical protein; K07054
Uncharacterized protein {ECO:0000313|EMBL:AEW02506.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_3295_curated_8
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5657..6814)
DNA (1158bp) protein (386aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AHJ99639.1}; EC=3.5.1.28 {ECO:0000313|EMBL:AHJ99639.1};; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036EC15A
scnpilot_solids2_trim150_scaffold_3295_curated_9
unknown

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comp(7144..7272)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 9 items

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