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scnpilot_solids2_trim150_scaffold_4257_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4257_curated_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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3..362
DNA (360bp) protein (120aa)
asparaginyl-tRNA synthetase; K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22]
Asparagine--tRNA ligase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JNB1_9BACT
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_4257_curated_2
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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375..977
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000349D327
Putative HD superfamily hydrolase {ECO:0000313|EMBL:AHM58466.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
putative HD superfamily hydrolase
scnpilot_solids2_trim150_scaffold_4257_curated_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1043..1642
DNA (600bp) protein (200aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMS3_CHIPD
multiple antibiotic resistance (MarC)-like protein; K05595 multiple antibiotic resistance protein
UPF0056 inner membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_4257_curated_4
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1663..2379
DNA (717bp) protein (239aa)
Uncharacterized protein n=2 Tax=Myroides RepID=K1IP40_9FLAO
Maebl {ECO:0000313|EMBL:KGO81472.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4257_curated_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2391..2966)
DNA (576bp) protein (192aa)
HhH-GPD family protein; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
HhH-GPD family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK12_CHIPD
HhH-GPD family protein {ECO:0000313|EMBL:ACU58353.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_4257_curated_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3025..4512)
DNA (1488bp) protein (496aa)
cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16]
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Cysteine--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7N7_NIAKG
scnpilot_solids2_trim150_scaffold_4257_curated_7
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4669..5415
DNA (747bp) protein (249aa)
alpha/beta hydrolase fold protein; K01259 proline iminopeptidase [EC:3.4.11.5]
Alpha/beta hydrolase fold containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5D2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIA88258.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
Displaying 7 items

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