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scnpilot_solids2_trim150_scaffold_2663_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2663_curated_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(33..737)
DNA (705bp) protein (235aa)
GntR domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y411_PEDHD
GntR family transcriptional regulator {ECO:0000313|EMBL:KIC94478.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_2663_curated_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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968..4309
DNA (3342bp) protein (1114aa)
TonB-denpendent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F0690
TonB-dependent receptor plug
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_2663_curated_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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4331..5863
DNA (1533bp) protein (511aa)
RagB/SusD domain protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QHI3_SPILD
RagB/SusD domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_2663_curated_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6225..6695
DNA (471bp) protein (157aa)
dihydrodipicolinate synthetase; K01639 N-acetylneuraminate lyase [EC:4.1.3.3]
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002F517ED
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:KIC91871.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids2_trim150_scaffold_2663_curated_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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6715..7851
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037D5CED
SSS sodium solute transporter superfamily protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_2663_curated_6
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7855..9099
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037F1D17
Uncharacterized protein {ECO:0000313|EMBL:CDD51670.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
major facilitator transporter
scnpilot_solids2_trim150_scaffold_2663_curated_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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9132..10313
DNA (1182bp) protein (394aa)
N-acylglucosamine 2-epimerase (EC:5.1.3.8); K01787 N-acylglucosamine 2-epimerase [EC:5.1.3.8]
N-acylglucosamine 2-epimerase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y403_PEDHD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_2663_curated_8
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10526..14317
DNA (3792bp) protein (1264aa)
Alpha-xylosidase n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NGG1_ELIME
Alpha-xylosidase {ECO:0000313|EMBL:KGO11405.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
glycosyl hydrolase
scnpilot_solids2_trim150_scaffold_2663_curated_9
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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14519..14974
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000375B235
DoxX family protein; K15977 putative oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
scnpilot_solids2_trim150_scaffold_2663_curated_10
unknown

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comp(15022..15168)
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 10 items

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