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scnpilot_solids2_trim150_scaffold_1309_curated

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1309_curated_1
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1..855
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00036A94E4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH48190.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
scnpilot_solids2_trim150_scaffold_1309_curated_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(924..2048)
DNA (1125bp) protein (375aa)
3-carboxymuconate cyclase-like protein (EC:3.1.1.31)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036EFE35
3-carboxymuconate cyclase {ECO:0000313|EMBL:KIC91587.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids2_trim150_scaffold_1309_curated_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2100..2642)
DNA (543bp) protein (181aa)
hypoxanthine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
Hypoxanthine phosphoribosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIC5_NIAKG
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:KIC90473.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids2_trim150_scaffold_1309_curated_4
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2639..3745)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A6277
Putative lysozyme {ECO:0000313|EMBL:GAO41321.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
scnpilot_solids2_trim150_scaffold_1309_curated_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3764..4405)
DNA (642bp) protein (214aa)
O-methyltransferase family 3 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIC7_NIAKG
O-methyltransferase family protein
O-methyltransferase family 3 {ECO:0000313|EMBL:AEW01743.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1309_curated_6
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4392..5909)
DNA (1518bp) protein (506aa)
Na+/proline symporter n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVH2_SOLCM
Na+/proline symporter
Na+/proline symporter {ECO:0000313|EMBL:AFD06352.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_1309_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5985..6524
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NN23_9SPHI
LOG family protein {ECO:0000313|EMBL:AHF15390.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein; K06966
scnpilot_solids2_trim150_scaffold_1309_curated_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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6537..7298
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B6635
serine 3-dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1309_curated_9
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7393..9321)
DNA (1929bp) protein (643aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380832B
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:ETZ24214.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
beta-N-acetylhexosaminidase
scnpilot_solids2_trim150_scaffold_1309_curated_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9659..10147
DNA (489bp) protein (163aa)
OsmC family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PTX1_CHIPD
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:ACU64566.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_1309_curated_11
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10205..12076)
DNA (1872bp) protein (624aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002FAB43A
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
NRAMP family Mn2+/Fe2+ transporter; K03322 manganese transport protein
scnpilot_solids2_trim150_scaffold_1309_curated_12
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12171..12848
DNA (678bp) protein (226aa)
Iron (Metal) dependent repressor, dtxr family protein n=2 Tax=Elizabethkingia anophelis RepID=H0KT91_9FLAO
Iron (Metal) dependent repressor, dtxr family protein {ECO:0000313|EMBL:KFF20014.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
DtxR family iron (metal) dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
scnpilot_solids2_trim150_scaffold_1309_curated_13
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12981..13733
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0P307_9SPHI
META domain protein {ECO:0000313|EMBL:EEI90399.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1309_curated_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13856..14452
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKM6_9SPHI
Thymidylate synthase {ECO:0000313|EMBL:AHF14635.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1309_curated_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14513..15415)
DNA (903bp) protein (301aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEW00822.1}; EC=1.1.1.157 {ECO:0000313|EMBL:AEW00822.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKY3_NIAKG
scnpilot_solids2_trim150_scaffold_1309_curated_16
unknown

Not on your lists

15690..16376
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036EFE88
hypothetical protein
scnpilot_solids2_trim150_scaffold_1309_curated_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16508..19039)
DNA (2532bp) protein (844aa)
ATPase AAA-2 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNQ5_NIAKG
ATPase AAA-2 domain-containing protein; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC
ATPase AAA-2 domain protein {ECO:0000313|EMBL:AEW00981.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1309_curated_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19336..19671
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003667690
sulfate transporter/antisigma-factor antagonist STAS
Sulfate transporter/antisigma-factor antagonist STAS {ECO:0000313|EMBL:AEW00982.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1309_curated_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19680..20582
DNA (903bp) protein (301aa)
Ribonuclease Z; K00784 ribonuclease Z [EC:3.1.26.11]
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Ribonuclease Z n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7D0_NIAKG
scnpilot_solids2_trim150_scaffold_1309_curated_20
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20651..21901)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382C2F5
Putative phosphoesterase {ECO:0000313|EMBL:GAO43318.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
metallophosphoesterase; K07098
scnpilot_solids2_trim150_scaffold_1309_curated_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21913..22440)
DNA (528bp) protein (176aa)
NADPH-dependent FMN reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ04_NIAKG
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:AEV97521.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1309_curated_22
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22634..23440
DNA (807bp) protein (269aa)
Chromosome segregation ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ02_NIAKG
Chromosome partitioning protein ParA {ECO:0000313|EMBL:KIC94175.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
chromosome segregation ATPase; K03496 chromosome partitioning protein
scnpilot_solids2_trim150_scaffold_1309_curated_23
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23456..24382
DNA (927bp) protein (309aa)
ParB-like partition protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ01_NIAKG
Chromosome partitioning protein ParB {ECO:0000313|EMBL:GAO43314.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
parB-like partition protein; K03497 chromosome partitioning protein, ParB family
scnpilot_solids2_trim150_scaffold_1309_curated_24
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24388..25020
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037FA8AF
Uncharacterized protein {ECO:0000313|EMBL:GAO43313.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1309_curated_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25032..25745
DNA (714bp) protein (238aa)
dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase [EC:1.3.1.26]
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Dihydrodipicolinate reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIZ9_NIAKG
scnpilot_solids2_trim150_scaffold_1309_curated_26
unknown

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comp(25862..25975)
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 26 items

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