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scnpilot_solids2_trim150_scaffold_1733_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1733_curated_1
unknown

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comp(2..214)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1733_curated_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(427..2208)
DNA (1782bp) protein (594aa)
von Willebrand factor type A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIC4_NIAKG
von Willebrand factor type A
von Willebrand factor type A {ECO:0000313|EMBL:AEW01740.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1733_curated_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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2436..3488
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003758426
YjgP/YjgQ family permease
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1733_curated_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3630..4880
DNA (1251bp) protein (417aa)
peptidase T; K01258 tripeptide aminopeptidase [EC:3.4.11.4]
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D72A3
scnpilot_solids2_trim150_scaffold_1733_curated_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5163..5840
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368F1BB
Biopolymer transporter ExbB {ECO:0000313|EMBL:KIC89350.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
outer membrane transport energization protein ExbB; K03561 biopolymer transport protein ExbB
scnpilot_solids2_trim150_scaffold_1733_curated_6

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5874..6275
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D0174
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:AIA18620.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
scnpilot_solids2_trim150_scaffold_1733_curated_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6262..7104)
DNA (843bp) protein (281aa)
protein-(glutamine-N5) methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKY8_NIAKG
Protein-(Glutamine-N5) methyltransferase, release factor-specific {ECO:0000313|EMBL:AEW00827.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1733_curated_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7166..8194
DNA (1029bp) protein (343aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Riboflavin biosynthesis protein RibD n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKY7_NIAKG
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1733_curated_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8232..9749
DNA (1518bp) protein (506aa)
Polysaccharide biosynthesis protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL46_NIAKG
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AEW01887.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1733_curated_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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9941..11452
DNA (1512bp) protein (504aa)
ATP synthase F1 subcomplex subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
F0F1 ATP synthase subunit beta n=1 Tax=Segetibacter koreensis RepID=UPI00035D04FA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1733_curated_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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11482..11733
DNA (252bp) protein (84aa)
ATP synthase F1 subcomplex subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
ATP synthase F1 subcomplex epsilon subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TID3_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1733_curated_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(12214..13971)
DNA (1758bp) protein (586aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036CAEE8
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family
Amino acid/peptide transporter {ECO:0000313|EMBL:ACU57697.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_1733_curated_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14143..14754)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003731359
cyclophilin type peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase cyclophilin type {ECO:0000313|EMBL:AEW02097.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1733_curated_14
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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14916..16094
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000367AA06
Acyltransferase {ECO:0000313|EMBL:KJS07062.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
acyltransferase 3
scnpilot_solids2_trim150_scaffold_1733_curated_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(16097..18019)
DNA (1923bp) protein (641aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366B4BE
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC93741.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ABC transporter; K06158 ATP-binding cassette, subfamily F, member 3
scnpilot_solids2_trim150_scaffold_1733_curated_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18133..18579)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036C4FA6
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1733_curated_17
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

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comp(19447..19908)
DNA (462bp) protein (154aa)
Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RWU7_NEMVE
hypothetical protein
Predicted protein {ECO:0000313|EMBL:EDO44038.1}; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (Starlet sea anemone).;"
Displaying 17 items

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