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scnpilot_solids2_trim150_scaffold_1436_curated

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1436_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(442..948)
DNA (507bp) protein (169aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Niabella soli DSM 19437 RepID=H1NLL5_9SPHI
Sugar phosphate isomerase {ECO:0000313|EMBL:AHF14801.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
xylose isomerase domain-containing protein
scnpilot_solids2_trim150_scaffold_1436_curated_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(962..1525)
DNA (564bp) protein (188aa)
twin-arginine translocation pathway signal protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4A752
Uncharacterized protein {ECO:0000313|EMBL:GAO44232.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
twin-arginine translocation pathway signal
scnpilot_solids2_trim150_scaffold_1436_curated_3
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1531..2988)
DNA (1458bp) protein (486aa)
oxidoreductase n=1 Tax=Segetibacter koreensis RepID=UPI000381A1C4
Oxidoreductase {ECO:0000313|EMBL:AKD02078.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
dehydrogenase
scnpilot_solids2_trim150_scaffold_1436_curated_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3000..4637)
DNA (1638bp) protein (546aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Niabella soli DSM 19437 RepID=H1NJP1_9SPHI
GMC family oxidoreductase {ECO:0000313|EMBL:KIC92971.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
glucose-methanol-choline oxidoreductase
scnpilot_solids2_trim150_scaffold_1436_curated_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4943..5416)
DNA (474bp) protein (158aa)
YjgF family translation initiation inhibitor n=1 Tax=Flexithrix dorotheae RepID=UPI0003651470
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AEW03481.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1436_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5565..5843
DNA (279bp) protein (93aa)
MtN3 and saliva related transmembrane protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUX3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF15791.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1436_curated_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5880..6770)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036415AB
hydroxypyruvate isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1436_curated_8
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6767..8071)
DNA (1305bp) protein (435aa)
Nucleoside:H+ symporter n=1 Tax=Pedobacter sp. BAL39 RepID=A6EFU1_9SPHI
Nucleoside:H+ symporter {ECO:0000313|EMBL:EDM35650.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
nucleoside:proton symporter
scnpilot_solids2_trim150_scaffold_1436_curated_9
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8111..9268
DNA (1158bp) protein (386aa)
Oxidoreductase domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XU44_PEDHD
Oxidoreductase {ECO:0000313|EMBL:KIA92932.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
oxidoreductase domain-containing protein
scnpilot_solids2_trim150_scaffold_1436_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9327..10382
DNA (1056bp) protein (352aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Niabella soli DSM 19437 RepID=H1NLL8_9SPHI
AP endonuclease {ECO:0000313|EMBL:AHF14798.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
xylose isomerase
scnpilot_solids2_trim150_scaffold_1436_curated_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10403..11140
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N130_9BACT
Glycosyl hydrolase {ECO:0000313|EMBL:KIC89785.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1436_curated_12
unknown

Not on your lists

11198..11473
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1436_curated_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11701..12546
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000375B6DB
Membrane protein {ECO:0000313|EMBL:AHF16339.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
membrane protein
scnpilot_solids2_trim150_scaffold_1436_curated_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12550..13587
DNA (1038bp) protein (346aa)
Sulfate-transporting ATPase {ECO:0000313|EMBL:AEW00565.1}; EC=3.6.3.25 {ECO:0000313|EMBL:AEW00565.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Sulfate-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFW6_NIAKG
sulfate-transporting ATPase
scnpilot_solids2_trim150_scaffold_1436_curated_15
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13559..14539
DNA (981bp) protein (327aa)
ABC transporter permease protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1T0_PEDHD
ABC transporter permease; K01992 ABC-2 type transport system permease protein
ABC transporter permease protein {ECO:0000313|EMBL:ACU05072.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_1436_curated_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14691..16055)
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036158D4
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEW03068.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1436_curated_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16078..17520)
DNA (1443bp) protein (481aa)
Outer membrane efflux protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNX6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17473.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
outer membrane efflux protein; K12340 outer membrane channel protein
scnpilot_solids2_trim150_scaffold_1436_curated_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17606..19120)
DNA (1515bp) protein (505aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
IMP cyclohydrolase n=1 Tax=Niabella aurantiaca RepID=UPI00036C37A1
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_1436_curated_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19140..21215)
DNA (2076bp) protein (692aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037835FD
ComEC/Rec2-like protein; K02238 competence protein ComEC
ComEC/Rec2-related protein {ECO:0000313|EMBL:AEW02013.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1436_curated_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21821..24463)
DNA (2643bp) protein (881aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F19D9
cyanophycin synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1436_curated_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24632..25549
DNA (918bp) protein (306aa)
cyanophycinase; K13282 cyanophycinase [EC:3.4.15.6]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003700405
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1436_curated_22
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25550..26266)
DNA (717bp) protein (239aa)
Nucleotidyl transferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIQ2_NIAKG
Nucleotidyltransferase {ECO:0000313|EMBL:GAL86277.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
nucleotidyltransferase
scnpilot_solids2_trim150_scaffold_1436_curated_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26321..27874)
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003624EB1
Uncharacterized protein {ECO:0000313|EMBL:KIC94838.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1436_curated_24
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28085..28468)
DNA (384bp) protein (128aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
Superoxide dismutase [Cu-Zn] n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KML9_SOLCM
Cu/Zn superoxide dismutase
scnpilot_solids2_trim150_scaffold_1436_curated_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28627..29076
DNA (450bp) protein (150aa)
RpiB/LacA/LacB family sugar-phosphate isomerase; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
ribose 5-phosphate isomerase n=1 Tax=Niabella aurantiaca RepID=UPI00037C6E51
Ribose 5-phosphate isomerase {ECO:0000313|EMBL:AHF16529.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_solids2_trim150_scaffold_1436_curated_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29152..30729
DNA (1578bp) protein (526aa)
Peptidase M28 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH05_NIAKG
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AEW00616.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1436_curated_27
Oceanobacillus iheyensis, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30740..31987
DNA (1248bp) protein (416aa)
Alpha/beta hydrolase fold protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NS07_9SPHI
hypothetical protein; K06889
Hypothetical conserved protein {ECO:0000313|EMBL:BAC12879.1}; TaxID=221109 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 /; HTE831).;"
scnpilot_solids2_trim150_scaffold_1436_curated_28
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


32121..32372
DNA (252bp) protein (84aa)
50S ribosomal protein L31 type B n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI55_CHIPD
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_1436_curated_29
unknown

Not on your lists

comp(32487..32648)
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1436_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33030..34055
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THS9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98524.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 54 in total

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