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scnpilot_solids2_trim150_scaffold_4630_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4630_curated_1
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2..775
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Rhodopirellula baltica SWK14 RepID=L7CMX1_RHOBT
Uncharacterized protein {ECO:0000313|EMBL:AHM58650.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4630_curated_2
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1106..2146
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000365ADF0
Uncharacterized protein {ECO:0000313|EMBL:EJR62202.1}; TaxID=1053238 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD154.;"
group 1 glycosyl transferase
scnpilot_solids2_trim150_scaffold_4630_curated_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2397..2984
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QQ75_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39508.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_solids2_trim150_scaffold_4630_curated_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2984..3271
DNA (288bp) protein (96aa)
Carbamoyltransferase; K00612 carbamoyltransferase [EC:2.1.3.-]
Carbamoyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLD2_NIAKG
Carbamoyltransferase {ECO:0000313|EMBL:KIC92275.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids2_trim150_scaffold_4630_curated_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3321..4616
DNA (1296bp) protein (432aa)
Carbamoyltransferase; K00612 carbamoyltransferase [EC:2.1.3.-]
Carbamoyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLD2_NIAKG
Carbamoyltransferase {ECO:0000313|EMBL:AEW03005.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_4630_curated_6
unknown

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comp(4780..4929)
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4630_curated_7
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5032..5877
DNA (846bp) protein (282aa)
Glycosyl transferase family 2 n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L463_HALH1
Family 2 glycosyl transferase {ECO:0000313|EMBL:KJS05889.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
family 2 glycosyl transferase
scnpilot_solids2_trim150_scaffold_4630_curated_8
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5858..6514
DNA (657bp) protein (219aa)
Capsular polysaccharide biosynthesis protein, putative n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GVA7_9SPHI
Capsular polysaccharide biosynthesis protein, putative {ECO:0000313|EMBL:EOR92874.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
PHP domain-containing protein
scnpilot_solids2_trim150_scaffold_4630_curated_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6499..7482)
DNA (984bp) protein (328aa)
erythrose 4-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
Erythrose 4-phosphate dehydrogenase {ECO:0000313|EMBL:AEW02056.1}; EC=1.2.1.72 {ECO:0000313|EMBL:AEW02056.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Erythrose 4-phosphate dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNX1_NIAKG
scnpilot_solids2_trim150_scaffold_4630_curated_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7731..8405)
DNA (675bp) protein (225aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41]
Phosphatidate cytidylyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THJ7_NIAKG
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:AEW02843.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_4630_curated_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8414..9373)
DNA (960bp) protein (320aa)
Abortive infection protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NV65_9SPHI
Abortive infection protein; K07052
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_4630_curated_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9458..10495
DNA (1038bp) protein (346aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
NifR3 family TIM-barrel protein n=1 Tax=Niabella aurantiaca RepID=UPI000380578A
tRNA-U20-dihydrouridine synthase
scnpilot_solids2_trim150_scaffold_4630_curated_13
Alistipes sp. CAG:514, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10538..10978
DNA (441bp) protein (147aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262696 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:514.;"
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:514 RepID=R5BM78_9BACT
cytosine/adenosine deaminase
scnpilot_solids2_trim150_scaffold_4630_curated_14
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11186..11368
DNA (183bp) protein (61aa)
Fatty acid desaturase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K783_9FLAO
Stearoyl-CoA 9-desaturase {ECO:0000313|EMBL:KFE98810.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
scnpilot_solids2_trim150_scaffold_4630_curated_15
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11452..12249
DNA (798bp) protein (266aa)
fatty acid desaturase; K00508 linoleoyl-CoA desaturase [EC:1.14.19.3]
Stearoyl-CoA 9-desaturase n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0PTF1_ELIME
Stearoyl-CoA 9-desaturase {ECO:0000313|EMBL:KGO10638.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
scnpilot_solids2_trim150_scaffold_4630_curated_16
unknown

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comp(12329..12718)
DNA (390bp) protein (130aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4630_curated_17
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12724..13302)
DNA (579bp) protein (193aa)
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Imtechella halotolerans K1 RepID=I0WDP0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ETN96032.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;"
RNA polymerase, sigma-24 subunit, ecf subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids2_trim150_scaffold_4630_curated_18
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13433..13786
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C757_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EIJ39450.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
membrane protein
scnpilot_solids2_trim150_scaffold_4630_curated_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13990..14604)
DNA (615bp) protein (205aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase n=1 Tax=Niabella soli DSM 19437 RepID=H1NQ05_9SPHI
Displaying 19 items

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