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scnpilot_solids2_trim150_scaffold_382_curated

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_382_curated_1
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..491
DNA (489bp) protein (163aa)
putative (2R)-phospho-3-sulfolactate synthase (ComA) (EC:4.4.1.19)
Putative (2R)-phospho-3-sulfolactate synthase (ComA) {ECO:0000313|EMBL:CCN40660.1}; EC=4.4.1.19 {ECO:0000313|EMBL:CCN40660.1};; TaxID=1238441 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio nigripulchritudo FTn2.;"
Putative (2R)-phospho-3-sulfolactate synthase (ComA) n=8 Tax=Vibrio nigripulchritudo RepID=U4DIR6_9VIBR
scnpilot_solids2_trim150_scaffold_382_curated_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

577..927
DNA (351bp) protein (117aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Alkylhydroperoxidase like protein, AhpD family n=3 Tax=Rhodanobacter RepID=G4FVM8_9GAMM id=719603 bin=RAAC39 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RAAC39 organism_group=Ignavibacteria
alkylhydroperoxidase
scnpilot_solids2_trim150_scaffold_382_curated_3
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1198..1614)
DNA (417bp) protein (139aa)
Methyltransferase domain protein n=2 Tax=Prevotella salivae RepID=E6MQD8_9BACT
Methyltransferase {ECO:0000313|EMBL:ETK12021.1}; TaxID=1411915 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 8/11.;"
putative RNA methylase
scnpilot_solids2_trim150_scaffold_382_curated_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1741..2940)
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035EBD00
Uncharacterized protein {ECO:0000313|EMBL:KIC89755.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_382_curated_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2972..4525)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPQ0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC89755.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_382_curated_6
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4704..7814
DNA (3111bp) protein (1037aa)
Putative uncharacterized protein id=4428121 bin=GWA2_Bacteroidetes_42_15 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
TonB-linked outer membrane protein, SusC/RagA family
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_382_curated_7
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7885..9405
DNA (1521bp) protein (507aa)
Putative uncharacterized protein id=1904200 bin=GWE2_Bacteroidetes_42_39 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_382_curated_8
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9493..11016
DNA (1524bp) protein (508aa)
Licheninase (EC:3.2.1.73)
Licheninase {ECO:0000313|EMBL:AEI51225.1}; EC=3.2.1.73 {ECO:0000313|EMBL:AEI51225.1};; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
Glucan endo-1,3-beta-D-glucosidase n=1 Tax=Niabella soli DSM 19437 RepID=H1NUH3_9SPHI
scnpilot_solids2_trim150_scaffold_382_curated_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11414..12214
DNA (801bp) protein (267aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEV99245.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEV99245.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371B5E7
3-oxoacyl-(acyl-carrier-protein) reductase
scnpilot_solids2_trim150_scaffold_382_curated_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12284..13105
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037E0832
Uncharacterized protein {ECO:0000313|EMBL:KIC91723.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein; K09134 hypothetical protein
scnpilot_solids2_trim150_scaffold_382_curated_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13145..13981
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000367289D
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_382_curated_12
unknown

Not on your lists

14026..14559
DNA (534bp) protein (178aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_382_curated_13
unknown

Not on your lists

14630..14830
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_382_curated_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14962..15819)
DNA (858bp) protein (286aa)
RNA polymerase sigma factor rpoD n=1 Tax=Segetibacter koreensis RepID=UPI000375E1C3
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIC94940.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_382_curated_15
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16211..17179
DNA (969bp) protein (323aa)
threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003600108
Threonine aldolase {ECO:0000313|EMBL:KIC91763.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids2_trim150_scaffold_382_curated_16
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17241..18869
DNA (1629bp) protein (543aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
glucose-6-phosphate isomerase; K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ10_NIAKG
scnpilot_solids2_trim150_scaffold_382_curated_17
unknown

Not on your lists

18927..19349
DNA (423bp) protein (141aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_382_curated_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19398..19880)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003626095
PUR-alpha/beta/gamma DNA/RNA-binding protein
PUR-alpha/beta/gamma DNA/RNA-binding protein {ECO:0000313|EMBL:AEV99985.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_382_curated_19
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20011..21861)
DNA (1851bp) protein (617aa)
Xenobiotic-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPZ2_NIAKG
Putative ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:GAO44552.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
xenobiotic-transporting ATPase; K06147 ATP-binding cassette, subfamily B, bacterial
scnpilot_solids2_trim150_scaffold_382_curated_20
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22040..22606
DNA (567bp) protein (189aa)
Acetyltransferase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L1E8_HALH1
Acetyltransferase {ECO:0000313|EMBL:AKD03768.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
acetyltransferase
scnpilot_solids2_trim150_scaffold_382_curated_21
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22661..25912)
DNA (3252bp) protein (1084aa)
RND efflux system, inner membrane transporter CmeB n=1 Tax=uncultured bacterium A1Q1_fos_1093 RepID=L7VZ12_9BACT
Putative RND-type efflux pump membrane protein {ECO:0000313|EMBL:GAO45722.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_solids2_trim150_scaffold_382_curated_22
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25941..27050)
DNA (1110bp) protein (370aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUK4_DYAFD
Putative RND-type efflux pump membrane fusion protein {ECO:0000313|EMBL:GAO45721.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
RND family efflux transporter MFP subunit; K03585 membrane fusion protein
scnpilot_solids2_trim150_scaffold_382_curated_23
Capnocytophaga granulosa, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27612..28949)
DNA (1338bp) protein (446aa)
OmpA/MotB domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDQ1_NIAKG
OmpA/MotB domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EPD28782.1}; TaxID=641143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga granulosa ATCC 51502.;"
scnpilot_solids2_trim150_scaffold_382_curated_24
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29014..29433)
DNA (420bp) protein (140aa)
Rare lipoprotein A n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A2B4_METMM
Putative RlpA-like lipoprotein {ECO:0000313|EMBL:GAO43279.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
rare lipoprotein A; K03642 rare lipoprotein A
scnpilot_solids2_trim150_scaffold_382_curated_25
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29459..31141)
DNA (1683bp) protein (561aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM94_CHIPD
Putative L,D-transpeptidase {ECO:0000313|EMBL:GAO43278.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
ErfK/YbiS/YcfS/YnhG family protein
scnpilot_solids2_trim150_scaffold_382_curated_26
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31167..31676)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT1_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC93152.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein; K06940
scnpilot_solids2_trim150_scaffold_382_curated_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31765..32670
DNA (906bp) protein (302aa)
Tyrosine recombinase XerC n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT0_NIAKG
Tyrosine recombinase xerC; K04763 integrase/recombinase XerD
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_382_curated_28
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32690..33244)
DNA (555bp) protein (185aa)
DSBA oxidoreductase n=1 Tax=Niabella soli DSM 19437 RepID=H1NK62_9SPHI
DSBA oxidoreductase {ECO:0000313|EMBL:AHF16999.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
DSBA oxidoreductase
scnpilot_solids2_trim150_scaffold_382_curated_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

33492..36332
DNA (2841bp) protein (947aa)
Glycine dehydrogenase (decarboxylating); K00281 glycine dehydrogenase [EC:1.4.4.2]
glycine dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI00037A8B13
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_382_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36451..39231
DNA (2781bp) protein (927aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D5968
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AEV98464.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 66 in total

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