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scnpilot_solids2_trim150_scaffold_566_curated_11

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(12413..13918)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 54 subunit, RpoN/SigL n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB80_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 499.0
  • Bit_score: 700
  • Evalue 1.30e-198
RNA polymerase sigma54 factor {ECO:0000313|EMBL:KIC94813.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 501.0
  • Bit_score: 717
  • Evalue 1.90e-203
RNA polymerase, sigma 54 subunit, RpoN/SigL; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 499.0
  • Bit_score: 700
  • Evalue 4.10e-199

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1506
ATGGCGCTGGCGCAAAGATTACAACAGAAACTCTCACAGAAGTTATCACCGCAGCAGATTCAGCTTATGAAGCTTTTGCAGGTGCCCACTGCGCATTTGGAGGACCGTGTGAAAGAAGAGCTCGAAGAAAATCCTGCGTTGGAAGCTGCAGAAGACGGGATTGAAGGTGAGGATGGGGCAGATTCAATGGATGGCTTTGACAATGAAGATGGTGTTGACGGGGCAGAAGATAATTATGAAGAAGACGGAAGTGAAGAAGCTTATGACAACATTGACATTTCGGAGTATGTCTCCGACGGAGATGATGAAGTGGGTGATTACAGGTACCGTGATGACAATTACGGAAGTGATGATGACAACAAAACAATTCCGCATAAAGTTGAAACTACTTTTTACGATAATTTAAAAAGCCAGTTACTGATGCTCGAACTGGATGACAGGCAAAAAAAGATTGCAGAGCAAATTATCGGAAGCATTGATGATGATGGATATCTGAGGAGGCCGGCCCCGGCGATTGCCGATGACCTTGCCTTCAGACAGAATATTACGGCATCGGAAGAAGAAATCATTGACCTTTTGGAGAAGATACAGCAGTTTGATCCGCCAGGTGTGGGAGCACGTGATCTGCAGGAATGCCTGCTGCTGCAACTTGCCCGCAAAAAGGCTGACGGGCAGGATGTGGACACAGCCATGCTGATTATCGAAAAACATTTTGATGAGTTTACCAAAAAACATTATGATAAAATCCAAAAGGTATTAGGGCTTGATGATGAACAAATCAAAGAGGTAATAAATCAAATCATCAGGCTGAACCCTAAGCCGGGCGGATTGATCGAAGAGTCGGATAAAATGCAGGCTTACGTAATACCCGACTTTTTTGTTCACAATAATAACGGGGTGCCTGAGGTAATCCTTAATTCCAAAAATGCGCCTGATTTGCGCATCAGCGAAGGATACCGTGATATGTTGCGCGACTTTGACCGGGGAAATAAAAAAGACAAAAAACAAAAAGAAACTGTCATTTTTATCAAACAGAAAATAGACAGCGCCAAATGGTTTATAGATGCCATCAAGCAAAGGCAACACACCTTGCTCATTACCATGCAGACCATTGTAAACTATCAAAAGGAATTTTTCCTGACCGGCGAAGAAACCAATTTAAAACCGATGATATTGAAAGATATTGCGGAAAGAACAGGGCTTGATATCAGTACCGTAAGCCGTGTGGCAAACAGCAAATTTGTGCAAACCGAATTCGGAACATACCGGCTCAAATTTTTCTTTAGCGAGAGCCTTGTTACAGATACAGGAGAAGAGGTGAGCACAAGGGAAGTAAAAAAAATACTGAGCGATCTCATAGAAGCAGAAAATAAAAAGAAACCATTGAGTGATGAGAAGCTGACCATTGCTCTTCAAAAGAAAGGATACAATATTGCACGCAGAACAGTAGCCAAATACAGGGAACAATTGAATATTCCTGTGGCCAGGCTGAGAAAAGAATTATAA
PROTEIN sequence
Length: 502
MALAQRLQQKLSQKLSPQQIQLMKLLQVPTAHLEDRVKEELEENPALEAAEDGIEGEDGADSMDGFDNEDGVDGAEDNYEEDGSEEAYDNIDISEYVSDGDDEVGDYRYRDDNYGSDDDNKTIPHKVETTFYDNLKSQLLMLELDDRQKKIAEQIIGSIDDDGYLRRPAPAIADDLAFRQNITASEEEIIDLLEKIQQFDPPGVGARDLQECLLLQLARKKADGQDVDTAMLIIEKHFDEFTKKHYDKIQKVLGLDDEQIKEVINQIIRLNPKPGGLIEESDKMQAYVIPDFFVHNNNGVPEVILNSKNAPDLRISEGYRDMLRDFDRGNKKDKKQKETVIFIKQKIDSAKWFIDAIKQRQHTLLITMQTIVNYQKEFFLTGEETNLKPMILKDIAERTGLDISTVSRVANSKFVQTEFGTYRLKFFFSESLVTDTGEEVSTREVKKILSDLIEAENKKKPLSDEKLTIALQKKGYNIARRTVAKYREQLNIPVARLRKEL*