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scnpilot_solids2_trim150_scaffold_2793_curated_13

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: 15253..15915

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SEG2_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 207.0
  • Bit_score: 250
  • Evalue 1.20e-63
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KGO97013.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 207.0
  • Bit_score: 250
  • Evalue 1.70e-63
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 215.0
  • Bit_score: 188
  • Evalue 2.30e-45

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Taxonomy

Flavobacterium enshiense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 663
ATGAATCCATCATTAACGGGAACAAGTTTATCTGATACAGAATGTATTTCCAGAATTCTGAACGGTGAAACCGAGTTATACCGGGAAATCATCAGGAAATACAACAGTTATCTTTACAAGATCGGGCGCAGTTATGGGTTTGATCATTCAGATGTGGAAGACCTCATGCAGGAAACTTACATCAATGCCTACACGAATCTGGCAAAGTTTGAAAACAGGTCTTCATTCAAAACGTGGATTGTGCGGATTATGCTCAACCAGTGTTATCACAGGAAACATAAAATAACCACCAGTCGCGAAATACCTGATGAAAACATCAATGAGGAAAATTCACCATTGCTTCACAGCTCCAGGCAGAGTGATCCGGGAAAAACAACTCAAAACCATGAACTCAGGAAAGTTCTTGAACAGGCCATCAACAATATTCCGGAAGACTACCGCATTGTATTTGCCTTGCGCGAACTTAACGGAATGAGTGTAAACGAAACTGCAACGGCATTGTCCATTTCCGAAAGCAACGTAAAAGTCAGGCTAAACAGGGCGCGACATTTACTTCAAAATAAAATTTCTCAAACCTATTCTCATGATGAGGTTTTCGAGTTTAACCTGATTTATTGTGACGGTATGGTAAACCGGGTAATGAATCGCATTTATGGTAAATAA
PROTEIN sequence
Length: 221
MNPSLTGTSLSDTECISRILNGETELYREIIRKYNSYLYKIGRSYGFDHSDVEDLMQETYINAYTNLAKFENRSSFKTWIVRIMLNQCYHRKHKITTSREIPDENINEENSPLLHSSRQSDPGKTTQNHELRKVLEQAINNIPEDYRIVFALRELNGMSVNETATALSISESNVKVRLNRARHLLQNKISQTYSHDEVFEFNLIYCDGMVNRVMNRIYGK*