ggKbase home page

scnpilot_solids2_trim150_scaffold_2793_curated

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2793_curated_1
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(384..758)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R1H6_OWEHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV31715.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_solids2_trim150_scaffold_2793_curated_2
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(930..1304)
DNA (375bp) protein (125aa)
Globin n=1 Tax=Algoriphagus machipongonensis RepID=A3HXX4_9BACT
globin; K06886 hemoglobin
Tax=BJP_08E140C01_Flavobacteriales_35_8
scnpilot_solids2_trim150_scaffold_2793_curated_3
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1545..2198)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037ED601
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Tax=GWF2_Bacteroidetes_33_38_curated
scnpilot_solids2_trim150_scaffold_2793_curated_4
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(2195..5632)
DNA (3438bp) protein (1146aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365B277
guanylate cyclase
Tax=CG_Bacteroid_01
scnpilot_solids2_trim150_scaffold_2793_curated_5
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5804..6751
DNA (948bp) protein (316aa)
Gluconolactonase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NR96_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHM61810.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2793_curated_6
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7046..7855)
DNA (810bp) protein (270aa)
type 12 methyltransferase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000374C6E7
Methyltransferase type 11 {ECO:0000313|EMBL:EHQ01842.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
Methyltransferase type 11
scnpilot_solids2_trim150_scaffold_2793_curated_7
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8158..8517)
DNA (360bp) protein (120aa)
L-lactate dehydrogenase (cytochrome); K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
L-lactate dehydrogenase (Cytochrome) n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PIA0_MURRD
L-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:ETN95126.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;"
scnpilot_solids2_trim150_scaffold_2793_curated_8
unknown

Not on your lists

8956..9192
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2793_curated_9
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9293..10399)
DNA (1107bp) protein (369aa)
glycoside hydrolase family protein n=1 Tax=Pedobacter agri RepID=UPI00029A74D2
Glycosyl hydrolase, family 18 {ECO:0000313|EMBL:EFK58418.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
chitinase
scnpilot_solids2_trim150_scaffold_2793_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10572..11045
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSS3_9SPHI
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:AHF16713.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
isoprenylcysteine carboxyl methyltransferase
scnpilot_solids2_trim150_scaffold_2793_curated_11
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

11155..13743
DNA (2589bp) protein (863aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000360548E
hypothetical protein
Tax=CG_Bacteroid_01
scnpilot_solids2_trim150_scaffold_2793_curated_12
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14163..14696
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035E7EC1
Membrane protein {ECO:0000313|EMBL:KIA88196.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein; K08995 putative membrane protein
scnpilot_solids2_trim150_scaffold_2793_curated_13
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15253..15915
DNA (663bp) protein (221aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SEG2_9FLAO
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KGO97013.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
sigma-70 family RNA polymerase sigma factor
scnpilot_solids2_trim150_scaffold_2793_curated_14
unknown

Not on your lists

15956..16180
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2793_curated_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16129..18249)
DNA (2121bp) protein (707aa)
peptidase S9 n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D5361
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ADB39278.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_solids2_trim150_scaffold_2793_curated_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18473..19912)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QBI5_SPILD
Uncharacterized protein {ECO:0000313|EMBL:AKD54361.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
Displaying 16 items

View Taxonomy