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scnpilot_solids2_trim150_scaffold_1537_curated_3

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: 1129..1398

Top 3 Functional Annotations

Value Algorithm Source
Histone family protein DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J5_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 89.0
  • Bit_score: 152
  • Evalue 2.30e-34
Transcriptional regulator HU subunit alpha {ECO:0000313|EMBL:KIC95229.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 89.0
  • Bit_score: 153
  • Evalue 1.10e-34
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 89.0
  • Bit_score: 152
  • Evalue 7.40e-35

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 270
ATGAACAAATCTGAATTAATCGCAAAGATGGCAGAAGACGCAGGTATCACCAAGACTCAGGCAAATGCTGCTTTAGATTCTTTCACCGGTGCTGTAACTAAAACACTGAAAGGTGGCAACAAAGTTACACTGGTAGGATTCGGTACCTTCTCTGTCAGCAAGAGAGCTGCCCGCAATGGCCGCAACCCTCAAACTGGTGCTACGATTAAAATCAAAGCAAAGAAAGTTGCAAGATTCAAACCAGGTAAAGAACTATCTTCTAAAATCTGA
PROTEIN sequence
Length: 90
MNKSELIAKMAEDAGITKTQANAALDSFTGAVTKTLKGGNKVTLVGFGTFSVSKRAARNGRNPQTGATIKIKAKKVARFKPGKELSSKI*