ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids2_trim150_scaffold_4011_curated_6

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(4747..5661)

Top 3 Functional Annotations

Value Algorithm Source
hydroxymethylbilane synthase; K01749 hydroxymethylbilane synthase [EC:2.5.1.61] similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 321.0
  • Bit_score: 369
  • Evalue 1.00e-99
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 321.0
  • Bit_score: 369
  • Evalue 4.40e-99
Hydroxymethylbilane synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMG3_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 321.0
  • Bit_score: 369
  • Evalue 3.20e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 915
ATGAAAGGAAAAATTAAAATCGGGACGAGATCAAGTCAATTGGCCCTTTGGCAGGCAGAACAGGTGGAAAAGATTTTAGAGGATAATGATTACCAAACGGAGATCGTTCCGATAAAGAGCGAGGGAGATATTGACCTTCATTCACCACTTTATGAAATGGGTTCTGTGGGCGTTTTTACAAGATATCTTGATGCGGCAGTTCTTTCAGGAAAAGTGGATATCGCAGTTCATTCCATGAAAGATGTGCCGACCATTCTGGCCAGGGGTTTGAAACAGGCGGCTGTATTGAAACGCGGGCCGGTCAAGGATTTGCTCCTTTACAGAAAAGACAAAACCTTTCTTGACGATCGCGAAAACCCTTGTCTCATCGCCACCGGAAGTATTCGCAGAAAAGCGCAATGGTTAAACCGTTATCCTAAAAGTGAAGTTGTTGGGTTGCGGGGAAATGTAAATACACGTCTTAAAAAACTGGAAGAAAGCAACTGGGACGGGGCGTTATTTGCAGCAGCGGGATTGGAACGTATTCATTTGCGTCCTGAAAAATCGGTAGAGTTGGATTGGATGTTGCCGGCGCCTGCCCAGGGAGCTATTATGGTGGTGTGCAGGGAAAATGATTCTTTTTGTTTGGATGCATGCTCTTTGATGAACGATGAGGAAACAGCATTGTGCACAGCAGTAGAGCGTGATTTTTTAAAAGCTTTGATGGGCGGTTGCGCCACCCCGATCAGTGCACTTGCACAAATAGAAAATGGCCGGATGTTTTTCCAGGGAAATGTTTTGTCGCCGGATGGAAAACAAAAAGCTTCCATTAAAAAAGATGCTTCGTTAGATAATGCAAGTGGGCTTGGAACAGAAGCCGGAAATGAATTGATGGCAGGTGAAGGAAGGCAAATAGTTGAATTGCTGAATCAATAA
PROTEIN sequence
Length: 305
MKGKIKIGTRSSQLALWQAEQVEKILEDNDYQTEIVPIKSEGDIDLHSPLYEMGSVGVFTRYLDAAVLSGKVDIAVHSMKDVPTILARGLKQAAVLKRGPVKDLLLYRKDKTFLDDRENPCLIATGSIRRKAQWLNRYPKSEVVGLRGNVNTRLKKLEESNWDGALFAAAGLERIHLRPEKSVELDWMLPAPAQGAIMVVCRENDSFCLDACSLMNDEETALCTAVERDFLKALMGGCATPISALAQIENGRMFFQGNVLSPDGKQKASIKKDASLDNASGLGTEAGNELMAGEGRQIVELLNQ*