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scnpilot_solids2_trim150_scaffold_4011_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4011_curated_1
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3..863)
DNA (861bp) protein (287aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
Coproporphyrinogen-III oxidase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5U8_9FLAO
oxygen-independent coproporphyrinogen III oxidase
scnpilot_solids2_trim150_scaffold_4011_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(944..1927)
DNA (984bp) protein (328aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
porphobilinogen synthase; K01698 porphobilinogen synthase [EC:4.2.1.24]
delta-aminolevulinic acid dehydratase n=1 Tax=Niabella aurantiaca RepID=UPI000377075F
scnpilot_solids2_trim150_scaffold_4011_curated_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1986..2924)
DNA (939bp) protein (313aa)
Coproporphyrinogen oxidase {ECO:0000256|SAAS:SAAS00122066}; EC=1.3.3.3 {ECO:0000256|SAAS:SAAS00122066};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
coproporphyrinogen oxidase; K00228 coproporphyrinogen III oxidase [EC:1.3.3.3]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037AE5EA
scnpilot_solids2_trim150_scaffold_4011_curated_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2981..4009)
DNA (1029bp) protein (343aa)
uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Uroporphyrinogen decarboxylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKZ6_CHIPD
scnpilot_solids2_trim150_scaffold_4011_curated_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3990..4724)
DNA (735bp) protein (245aa)
uroporphyrinogen III synthase HEM4; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003800243
Uncharacterized protein {ECO:0000313|EMBL:KIC96107.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_4011_curated_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4747..5661)
DNA (915bp) protein (305aa)
hydroxymethylbilane synthase; K01749 hydroxymethylbilane synthase [EC:2.5.1.61]
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Hydroxymethylbilane synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMG3_NIAKG
scnpilot_solids2_trim150_scaffold_4011_curated_7
unknown

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comp(5663..5788)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 7 items

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