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scnpilot_solids2_trim150_scaffold_2960_curated_5

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(4378..5340)

Top 3 Functional Annotations

Value Algorithm Source
RHS repeat-associated core domain protein n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0P175_WEEVC similarity UNIREF
DB: UNIREF100
  • Identity: 36.1
  • Coverage: 277.0
  • Bit_score: 170
  • Evalue 2.30e-39
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 277.0
  • Bit_score: 170
  • Evalue 7.20e-40
RHS repeat-associated core domain protein {ECO:0000313|EMBL:ADX67574.1}; Flags: Precursor;; TaxID=865938 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Weeksella.;" source="Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC; 16016 / NCTC 11634 / CL345/78).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.1
  • Coverage: 277.0
  • Bit_score: 170
  • Evalue 3.20e-39

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Taxonomy

Weeksella virosa → Weeksella → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 963
TTGGGCTGCTTAAAACTACCATATCAAAATCCGGAGAGCTTTTTAAAAGTTGCTTATACAAATCCTGAAAAATGCAAAAATCAGGATGGTAGTTACTACCCATTCGGGTTGACAATGGCGGGGATAAGTTCTAAAGCTGCAGGCAGTATTGAAAGTAAACAGAAGTTCCAGGAACAAGAGCTTGCACATAATGAGTTTAGTGATGGCAGTGGTTTAGAGATGTACGAGTTTAAGTACAGAATGCATGACCCACAAACGGGAAGATTTTGGCAAATAGATCCACTTGCTGATAAATACGTTTATAATAGCACTTATGCGTTTAGTGAAAATCAGGTTATCTCCTACAGAGAGTTAGAAGGACTTGAAAAAGTATTAGCAATATTCTTTCATGGAGGGTTTGAAGGTGGAGGTAAAACAACTACACCGGAAAAATCTGGTGGTGCTGGTGTAATTTATAACGATACAAAAAAGTTTGCAGAGAATACCGGAAAAGGTTTTGCTGGTACAATTATAGCTCCAGGTGTAAACACAGACAATAGCGTAAAAACTGCAAATGATTTTATTAAGAATAATTATGAAGAAGGAGATTTAGTTGTTGTTTACGGTTATAGTTTTGGTGGAGATGCGGCAGTTGAATTGTCAAAAAGTTTAGGTGAGCAAGGAAAAAGTGTGAATTTACTTGTTACAATAGATGCTTCTGATGGACCGGGCAACTTAACAACAGATACTGATATTCCTTCCAATGTAAATACTAATCTGAACCTTTATCAGAATAAGCCAGCTACAAAAACACGGGCTAATGGTGAGCCGAATACGGCTGATGATCCAAACAAGACAAACGTTATTAACAGAAATGTTTCCGACTCGAATACTACACACGGCAACATTCAGGAGAAAAACAAAACTCTGATTGAAAATGTAATTAACTTCTTTATTCAGCAATATAATCCCCCTAAAAAATGA
PROTEIN sequence
Length: 321
LGCLKLPYQNPESFLKVAYTNPEKCKNQDGSYYPFGLTMAGISSKAAGSIESKQKFQEQELAHNEFSDGSGLEMYEFKYRMHDPQTGRFWQIDPLADKYVYNSTYAFSENQVISYRELEGLEKVLAIFFHGGFEGGGKTTTPEKSGGAGVIYNDTKKFAENTGKGFAGTIIAPGVNTDNSVKTANDFIKNNYEEGDLVVVYGYSFGGDAAVELSKSLGEQGKSVNLLVTIDASDGPGNLTTDTDIPSNVNTNLNLYQNKPATKTRANGEPNTADDPNKTNVINRNVSDSNTTHGNIQEKNKTLIENVINFFIQQYNPPKK*