ggKbase home page

scnpilot_solids2_trim150_scaffold_2960_curated_13

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: 11658..11990

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM08_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 108.0
  • Bit_score: 114
  • Evalue 8.70e-23
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 108.0
  • Bit_score: 114
  • Evalue 2.70e-23
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACU62222.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 108.0
  • Bit_score: 114
  • Evalue 1.20e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 333
ATGAGTTTCGGAAAAAGACTGGCAGAGCTTAGAAAAAAAGCAGGTATGTCGCAGGAAGAACTTGCAGCAAAATTGGGCACCCAAGGCCCGGCCATAGGACGTTACGAAAGAGAAGTGGCCAGGCCCACCATTGAGGTCGCAACCAAAATATCAAAAATACTGGGCGTATCCCTGGATTATCTCGTAGGCAATACGGATTCAGAACTGGATGCCGATACCCTTTCCAGAATCCAGCAGGTGGATAAACTTTCAGGTGAAAATAAAAAAATCGTCTATACCCTTCTTGATGCTTTTATGAGAGATGTAAAAACAAAACAGGCTTATGCGCTGTAA
PROTEIN sequence
Length: 111
MSFGKRLAELRKKAGMSQEELAAKLGTQGPAIGRYEREVARPTIEVATKISKILGVSLDYLVGNTDSELDADTLSRIQQVDKLSGENKKIVYTLLDAFMRDVKTKQAYAL*