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scnpilot_solids2_trim150_scaffold_856_curated_5

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: 7014..8162

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S884_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 336.0
  • Bit_score: 411
  • Evalue 7.00e-112
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 336.0
  • Bit_score: 411
  • Evalue 2.20e-112
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADY52346.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 336.0
  • Bit_score: 411
  • Evalue 9.80e-112

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Taxonomy

Pseudopedobacter saltans → Pseudopedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1149
ATGGAAAACTGTTTCATAGTAATGGATAATCAGGTGGAATATTTTAATCAGGCCGGGAATATAATCTCCTGTTTTATAATCAGCCGTGAGAGTGGATTTATATCAAATACTTTAATTAATTTTATTGGAATGAAGAGGAAGCACCTTGTCACAATTAAGGATATTGCCGCGGATCTGAAGATTTCTGTTTCAACGGTATCGAGAGCATTCAGGAATACCTTTGATGTAAGTAAGGAAACAAGGGATGCTGTTTTGGCGAAGGGTGAAGAATTAAATTATAAGCCAAATCTTAATGCCCGTGGGCTGGTCAATTATAAATCAAGAAATATTGCCGTTATTTTACCTACAATAACTAATTTCTATTTTTCAACGGCAATTAGCGGCATTCAGGATGTCGCCTATGAAAACGGGTTTAATATTATTTTTTATGTTACCGGAGAATCAACCGAAAGGGAACTCCATATTGCACAATCTCTCTCGCTCAGTTCAATAGACGGGCTTCTCGTCAGTATCACTTCGGAATCGGAGAAGTGTGATCACTTCTCTAAGATAATTGATTACGGGTTGCCTATAGTGTTTTTTGATAGAGTTTCAGATTCGCTGATAACATCAAAGGTTACACAGAATGATTATGAGGGAGCTTTTACTGCAGTTGAGCATCTTGTGAAACAAGGGTACAGGAGGATCGCCTACATTGGCGGGCCGCTCAGCCTGGTCTTTTCAAGAGAAAGACTAAGAGGTTATCTGGCAGCTCTAAAAAGATATGGCTTGCCTGTTGAACAATCATTGATAATTCATTCAGATTTTAACCAGGCAAGTGGGGGCGCAGATGCCGAAAAGTTATTGGGATATGGAGAAAACAAACCTGATGCTATTTTTGCAGTTAATGATAGAAAGGCAATTGGAGCAATGCTAAAAATGAAAGAGAGAGGAATAAAAATTGGTAAGGAAATCGGTGTTATTGGATTCACCAATGACCCGATGGCCGGGATTATCTCTCCGGGCCTCACAACCATGGAAGAGCCTGCCTTGGAAGTAGGAAAACAAAGTTGCGAATTATTACTTAAGCATATTTCCAAGAAGAACTTCCAGCCAAAGTCAATCATTTTAAGTGGAAAATTAATAGTCCGTGAATCCACAGTAAGATAG
PROTEIN sequence
Length: 383
MENCFIVMDNQVEYFNQAGNIISCFIISRESGFISNTLINFIGMKRKHLVTIKDIAADLKISVSTVSRAFRNTFDVSKETRDAVLAKGEELNYKPNLNARGLVNYKSRNIAVILPTITNFYFSTAISGIQDVAYENGFNIIFYVTGESTERELHIAQSLSLSSIDGLLVSITSESEKCDHFSKIIDYGLPIVFFDRVSDSLITSKVTQNDYEGAFTAVEHLVKQGYRRIAYIGGPLSLVFSRERLRGYLAALKRYGLPVEQSLIIHSDFNQASGGADAEKLLGYGENKPDAIFAVNDRKAIGAMLKMKERGIKIGKEIGVIGFTNDPMAGIISPGLTTMEEPALEVGKQSCELLLKHISKKNFQPKSIILSGKLIVRESTVR*