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scnpilot_solids2_trim150_scaffold_856_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_856_curated_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..1824
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UYT3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73862.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
periplasmic beta-glucosidase
scnpilot_solids2_trim150_scaffold_856_curated_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1967..4252
DNA (2286bp) protein (762aa)
alpha-N-acetylglucosaminidase; K01205 alpha-N-acetylglucosaminidase [EC:3.2.1.50]
Alpha-N-acetylglucosaminidase {ECO:0000313|EMBL:AEV97142.1}; EC=3.2.1.50 {ECO:0000313|EMBL:AEV97142.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Alpha-N-acetylglucosaminidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBN2_NIAKG
scnpilot_solids2_trim150_scaffold_856_curated_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4314..5447
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y6K9_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ25853.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_856_curated_4
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(5601..6905)
DNA (1305bp) protein (435aa)
fuconate dehydratase n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255BB5B
mandelate racemase/muconate lactonizing protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
scnpilot_solids2_trim150_scaffold_856_curated_5
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7014..8162
DNA (1149bp) protein (383aa)
Transcriptional regulator, LacI family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S884_PEDSD
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADY52346.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_856_curated_6
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8370..11495
DNA (3126bp) protein (1042aa)
TonB-dependent receptor plug n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C4Y3_SPHS2
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADZ76957.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids2_trim150_scaffold_856_curated_7
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11512..13062
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C4Y2_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ76956.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids2_trim150_scaffold_856_curated_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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13310..15946
DNA (2637bp) protein (879aa)
Acetyl xylan esterase id=3870297 bin=GWC2_Bacteroidetes_46_850 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
acetyl xylan esterase
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids2_trim150_scaffold_856_curated_9
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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15986..17392
DNA (1407bp) protein (469aa)
Oxidoreductase domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y204_PEDHD
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACU02997.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_856_curated_10
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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17435..18181
DNA (747bp) protein (249aa)
glucosamine/galactosamine-6-phosphate isomerase; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6]
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Glucosamine/galactosamine-6-phosphate isomerase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S886_PEDSD
scnpilot_solids2_trim150_scaffold_856_curated_11
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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18242..19429
DNA (1188bp) protein (396aa)
N-acetylglucosamine-6-phosphate deacetylase; K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C3K5_SPHS2
scnpilot_solids2_trim150_scaffold_856_curated_12
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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19581..20906
DNA (1326bp) protein (442aa)
major facilitator transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI0003798DF6
Glucose/galactose transporter {ECO:0000313|EMBL:AHM63023.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
glucose/galactose transporter
scnpilot_solids2_trim150_scaffold_856_curated_13
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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20974..22497
DNA (1524bp) protein (508aa)
Altronate oxidoreductase {ECO:0000313|EMBL:KHJ39336.1}; EC=1.1.1.58 {ECO:0000313|EMBL:KHJ39336.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
Tagaturonate reductase; K00041 tagaturonate reductase [EC:1.1.1.58]
Tagaturonate reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDT4_NIAKG
scnpilot_solids2_trim150_scaffold_856_curated_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22490..24139
DNA (1650bp) protein (550aa)
altronate dehydratase; K01685 altronate hydrolase [EC:4.2.1.7]
Altronate dehydratase {ECO:0000313|EMBL:AEW01533.1}; EC=4.2.1.7 {ECO:0000313|EMBL:AEW01533.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Altronate dehydratase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDT3_NIAKG
Displaying 14 items

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