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scnpilot_solids2_trim150_scaffold_354_curated

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_354_curated_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(369..1361)
DNA (993bp) protein (331aa)
Glycosyl transferase family 9 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP91_NIAKG
glycosyl transferase family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_354_curated_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1591..2817)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FB4B2
MFS transporter {ECO:0000313|EMBL:KIC93192.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
major facilitator superfamily protein
scnpilot_solids2_trim150_scaffold_354_curated_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2829..3800)
DNA (972bp) protein (324aa)
SNARE associated Golgi protein-like protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP89_NIAKG
DedA family protein {ECO:0000313|EMBL:GAO42923.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_354_curated_4
Blattabacterium sp. (Panesthia angustipennis spadica), Blattabacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3917..5269)
DNA (1353bp) protein (451aa)
Glutamate/aspartate:proton symporter n=1 Tax=Blattabacterium sp. (Panesthia angustipennis spadica) str. BPAA RepID=M5ADF3_9FLAO
gltP; glutamate/aspartate:proton symporter
Glutamate/aspartate:proton symporter {ECO:0000313|EMBL:BAM99579.1}; TaxID=1229512 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Blattabacteriaceae; Blattabacterium.;" source="Blattabacterium sp. (Panesthia angustipennis spadica) str. BPAA.;"
scnpilot_solids2_trim150_scaffold_354_curated_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5483..7126
DNA (1644bp) protein (548aa)
Amino acid permease-associated region n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VU36_DYAFD
amino acid permease-associated protein; K03294 basic amino acid/polyamine antiporter, APA family
Amino acid permease-associated region {ECO:0000313|EMBL:ACT94804.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_354_curated_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7248..7736)
DNA (489bp) protein (163aa)
zinc-binding CMP/dCMP deaminase; K01489 cytidine deaminase [EC:3.5.4.5]
CMP/dCMP deaminase zinc-binding n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJS9_CHIPD
CMP/dCMP deaminase zinc-binding {ECO:0000313|EMBL:ACU63839.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_354_curated_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7788..9284)
DNA (1497bp) protein (499aa)
signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372AFB6
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_354_curated_8
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9420..10076)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0P119_9SPHI
Alpha/beta hydrolase {ECO:0000313|EMBL:AIM37225.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_354_curated_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10085..11248)
DNA (1164bp) protein (388aa)
Putative two component, sigma54 specific, transcriptional regulator n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6W5_NIAKG
putative two component sigma-54 specific transcriptional regulator
Putative two component, sigma54 specific, transcriptional regulator {ECO:0000313|EMBL:AEV97968.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_354_curated_10
unknown

Not on your lists

11537..11683
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_354_curated_11
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11687..13768)
DNA (2082bp) protein (694aa)
TonB-dependent receptor n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ETZ1_EMTOG
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AFK03144.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids2_trim150_scaffold_354_curated_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13849..14838)
DNA (990bp) protein (330aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
pyruvate dehydrogenase subunit beta n=1 Tax=Segetibacter koreensis RepID=UPI000361BF63
Transketolase central region {ECO:0000313|EMBL:ACU63845.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_354_curated_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14985..15734
DNA (750bp) protein (250aa)
Transcriptional regulator, DeoR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8M4_NIAKG
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:AEW00196.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_354_curated_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17343..18395)
DNA (1053bp) protein (351aa)
Beta-lactamase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFD9_NIAKG
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AEV97349.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_354_curated_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18479..21124
DNA (2646bp) protein (882aa)
molecular chaperone ClpB n=1 Tax=Segetibacter koreensis RepID=UPI00035EE016
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
scnpilot_solids2_trim150_scaffold_354_curated_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21495..22733
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFD0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97340.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_354_curated_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23002..23982
DNA (981bp) protein (327aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]
acetyl-CoA carboxylase subunit alpha n=1 Tax=Segetibacter koreensis RepID=UPI0003723458
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_354_curated_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24084..24980
DNA (897bp) protein (299aa)
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7C9_NIAKG
scnpilot_solids2_trim150_scaffold_354_curated_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25119..26816
DNA (1698bp) protein (566aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362D28D
Uncharacterized protein {ECO:0000313|EMBL:AHF17015.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_354_curated_20
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26875..27507)
DNA (633bp) protein (211aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VLG2_9BACT
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EPR71050.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids2_trim150_scaffold_354_curated_21
unknown

Not on your lists

27673..27804
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_354_curated_22
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27866..31156
DNA (3291bp) protein (1097aa)
TonB-dependent receptor n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VNU9_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:EPR71052.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
TonB-dependent receptor plug
scnpilot_solids2_trim150_scaffold_354_curated_23
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31184..32764
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7X4N4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EPR71053.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_354_curated_24
unknown

Not on your lists

comp(32872..33072)
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_354_curated_25
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

33108..36080
DNA (2973bp) protein (991aa)
Putative pectin lyase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EUG7_9BACT
putative pectin lyase
Tax=CG_Arma_01
scnpilot_solids2_trim150_scaffold_354_curated_26
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36116..37966
DNA (1851bp) protein (617aa)
Uncharacterized protein id=4058328 bin=GWF2_Bacteroidetes_41_9 species=Thermoanaerobacterium saccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_solids2_trim150_scaffold_354_curated_27
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38159..38731
DNA (573bp) protein (191aa)
Putative ISCps8 transposase n=1 Tax=Bacteroides sp. CAG:530 RepID=R6CJA3_9BACE
Transposase {ECO:0000313|EMBL:AHW60043.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
transposase, IS116/IS110/IS902 family
scnpilot_solids2_trim150_scaffold_354_curated_28
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

39223..41532
DNA (2310bp) protein (770aa)
Alpha-1,2-mannosidase, putative n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KS37_SOLCM
Alpha-mannosidase {ECO:0000313|EMBL:AKD02308.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
alpha-1,2-mannosidase
scnpilot_solids2_trim150_scaffold_354_curated_29
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41636..43084
DNA (1449bp) protein (483aa)
oxidoreductase n=1 Tax=Niabella aurantiaca RepID=UPI00036E5063
Oxidoreductase {ECO:0000313|EMBL:AHF14249.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
oxidoreductase domain-containing protein
scnpilot_solids2_trim150_scaffold_354_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(43461..44675)
DNA (1215bp) protein (405aa)
succinyl-CoA ligase subunit beta; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQP4_NIAKG
Displaying items 1-30 of 53 in total

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