ggKbase home page

SCNpilot_solid_1_scaffold_54

Search features with annotation key words

Displaying items 271-300 of 485 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_54_271
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(288925..289662)
DNA (738bp) protein (246aa)
Methyltransferase type 12 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W213_ACISJ rbh
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ABM40288.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (stra
SCNpilot_solid_1_scaffold_54_272
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(289668..290582)
DNA (915bp) protein (305aa)
ParB-like partition protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRD0_ALIDB rbh
parb-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:AEB82499.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
SCNpilot_solid_1_scaffold_54_273
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(290590..291126)
DNA (537bp) protein (179aa)
UPI000399DC30 related cluster n=1 Tax=unknown RepID=UPI000399DC30 rbh
Predicted esterase of the alpha/beta hydrolase fold {ECO:0000313|EMBL:GAD22709.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" s
hypothetical protein
SCNpilot_solid_1_scaffold_54_274
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(291325..297186)
DNA (5862bp) protein (1954aa)
Conserved repeat protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J2LGT8_9BURK rbh
Conserved repeat protein {ECO:0000313|EMBL:EJL84378.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" sou
hypothetical protein rbh
SCNpilot_solid_1_scaffold_54_275
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(297323..298102)
DNA (780bp) protein (260aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9M9W6_ACIET rbh
Sporulation initiation inhibitor protein soj {ECO:0000313|EMBL:EWS63644.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" sour
cobyrinic acid ac-diamide synthase
SCNpilot_solid_1_scaffold_54_276
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(298249..298899)
DNA (651bp) protein (217aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltran
Ribosomal RNA small subunit methyltransferase G n=2 Tax=Alicycliphilus denitrificans RepID=E8TRC6_ALIDB rbh
methyltransferase GidB
SCNpilot_solid_1_scaffold_54_277
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(298896..300848)
DNA (1953bp) protein (651aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=Alicycliphilus denitrificans RepID=F4GCP0_ALIDK rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=596153 species="Bacter
glucose inhibited division protein A
SCNpilot_solid_1_scaffold_54_278
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

300940..302055
DNA (1116bp) protein (372aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9M9V8_ACIET
NADH:flavin oxidoreductase/NADH oxidase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ACM31529.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidov
SCNpilot_solid_1_scaffold_54_279
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(302034..302480)
DNA (447bp) protein (149aa)
Transcriptional regulator, MerR family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9M9V3_ACIET
transcriptional regulator, MerR family
Transcriptional regulator {ECO:0000313|EMBL:KGH25935.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (
SCNpilot_solid_1_scaffold_54_280
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(302477..302674)
DNA (198bp) protein (66aa)
Heavy metal transport/detoxification protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W1Z9_ACISJ
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ABM40274.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="A
SCNpilot_solid_1_scaffold_54_281
Bizionia argentinensis, Bizionia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(302757..304778)
DNA (2022bp) protein (674aa)
Sodium/hydrogen exchanger family protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EA03_9FLAO
Sodium/hydrogen exchanger family protein {ECO:0000313|EMBL:EGV44769.1}; TaxID=1046627 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizionia.;" source="Bizioni
sodium:proton antiporter
SCNpilot_solid_1_scaffold_54_282
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

304886..305593
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1E7R0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE48359.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
hypothetical protein
SCNpilot_solid_1_scaffold_54_283
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

305631..306122
DNA (492bp) protein (164aa)
Nlp/p60 protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HSZ7_9BURK
nlp/p60 protein
Nlp/p60 protein {ECO:0000313|EMBL:AFU43777.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_solid_1_scaffold_54_284
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(306123..306668)
DNA (546bp) protein (182aa)
Lipid A deacylase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRA5_ALIDB
lipid A 3-O-deacylase-like protein
Lipid A 3-O-deacylase-like protein {ECO:0000313|EMBL:GAO25751.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
SCNpilot_solid_1_scaffold_54_285
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(306744..307280)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000372AEE2
Uncharacterized protein {ECO:0000313|EMBL:GAD21241.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_solid_1_scaffold_54_286
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

307480..308373
DNA (894bp) protein (298aa)
Exonuclease RdgC n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRA7_ALIDB rbh
exonuclease rdgc
Exonuclease RdgC {ECO:0000313|EMBL:ADU97818.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrific
SCNpilot_solid_1_scaffold_54_287
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

308378..309631
DNA (1254bp) protein (418aa)
Nucleoside recognition domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRA8_ALIDB rbh
nucleoside recognition domain-containing protein
Nucleoside recognition domain-containing protein {ECO:0000313|EMBL:GAO25754.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;"
SCNpilot_solid_1_scaffold_54_288
unknown

Not on your lists

comp(309673..309768)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_54_289
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(309878..310303)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B2AGJ6_CUPTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP62895.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwane
SCNpilot_solid_1_scaffold_54_290
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(310436..311623)
DNA (1188bp) protein (396aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TTN5_ALIDB rbh
Beta-ketothiolase {ECO:0000313|EMBL:GAO25188.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;
SCNpilot_solid_1_scaffold_54_291
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(311644..312420)
DNA (777bp) protein (259aa)
enoyl-CoA hydratase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003783347 rbh
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:GAD21248.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acido
enoyl-CoA hydratase
SCNpilot_solid_1_scaffold_54_292
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(312570..314354)
DNA (1785bp) protein (595aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEB86576.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AEB86576.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
Long-chain-fatty-acid--CoA ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6W4_ALIDK rbh
SCNpilot_solid_1_scaffold_54_293
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(314351..315172)
DNA (822bp) protein (274aa)
ABC transporter related protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTN7_ALIDB
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:AEB86577.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
SCNpilot_solid_1_scaffold_54_294
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(315313..316500)
DNA (1188bp) protein (396aa)
Extracellular ligand-binding receptor n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTN8_ALIDB rbh
ABC transporter substrate-binding protein
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADV01624.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphi
SCNpilot_solid_1_scaffold_54_295
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(316539..317576)
DNA (1038bp) protein (346aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6W7_ALIDK rbh
ABC transporter permease
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEB86579.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" so
SCNpilot_solid_1_scaffold_54_296
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(317581..318459)
DNA (879bp) protein (293aa)
Inner-membrane translocator n=2 Tax=Alicycliphilus denitrificans RepID=E8TTP0_ALIDB rbh
ABC transporter permease
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEB86580.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" so
SCNpilot_solid_1_scaffold_54_297
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(318459..319304)
DNA (846bp) protein (282aa)
ABC transporter related protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTP1_ALIDB rbh
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADV01627.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
SCNpilot_solid_1_scaffold_54_298
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

319434..320162
DNA (729bp) protein (243aa)
Regulatory protein TetR n=2 Tax=Alicycliphilus denitrificans RepID=E8TTP2_ALIDB rbh
regulatory protein tetr
Regulatory protein TetR {ECO:0000313|EMBL:ADV01628.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_solid_1_scaffold_54_299
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(320104..320634)
DNA (531bp) protein (177aa)
Transmembrane pair domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TT20_ALIDB
transmembrane pair domain-containing protein
Transmembrane pair domain-containing protein {ECO:0000313|EMBL:ADU97987.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alic
SCNpilot_solid_1_scaffold_54_300
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

320650..321201
DNA (552bp) protein (184aa)
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=535289 species="Bacteria; Proteobacteria; Betapro
Shikimate kinase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAK6_ACIET
Displaying items 271-300 of 485 in total

View Taxonomy