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SCNpilot_solid_1_scaffold_54

Search features with annotation key words

Displaying items 391-420 of 485 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_54_391
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

411955..412275
DNA (321bp) protein (107aa)
Flagellar basal body rod protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYQ0_ALIDB
flagellar basal body rod protein
Flagellar basal body rod protein {ECO:0000313|EMBL:ADV02059.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyclip
SCNpilot_solid_1_scaffold_54_392
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(412236..412496)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSD0_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL24772.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
hypothetical protein
SCNpilot_solid_1_scaffold_54_393
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

412631..413695
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I702_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU48415.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
SCNpilot_solid_1_scaffold_54_394
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

413767..415254
DNA (1488bp) protein (496aa)
Putative transmembrane protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD76_ACISJ rbh
hypothetical protein
Putative transmembrane protein {ECO:0000313|EMBL:ABM44201.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
SCNpilot_solid_1_scaffold_54_395
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

415281..415499
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYP6_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86987.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_solid_1_scaffold_54_396
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

415670..417493
DNA (1824bp) protein (608aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD74_ACISJ
DNA methylase N-4/N-6 domain-containing protein
DNA methylase N-4/N-6 domain protein {ECO:0000313|EMBL:ABM44199.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora
SCNpilot_solid_1_scaffold_54_397
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

417499..419202
DNA (1704bp) protein (568aa)
hypothetical protein; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa ATCC 14886 RepID=K1CQ57_PSEAI rbh
hypothetical protein
SCNpilot_solid_1_scaffold_54_398
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

419321..422002
DNA (2682bp) protein (894aa)
Type III restriction enzyme, res subunit n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD73_ACISJ rbh
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:ABM44198.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acido
type III restriction enzyme, res subunit
SCNpilot_solid_1_scaffold_54_399
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

421999..423546
DNA (1548bp) protein (516aa)
spermidine synthase (EC:2.5.1.16)
spermidine synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000382BF7A rbh
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=12
SCNpilot_solid_1_scaffold_54_400
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

423577..424779
DNA (1203bp) protein (401aa)
Threonine dehydratase {ECO:0000313|EMBL:EIK92930.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EIK92930.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hy
Threonine dehydratase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUP0_9BURK rbh
threonine dehydratase
SCNpilot_solid_1_scaffold_54_401
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

425079..428807
DNA (3729bp) protein (1243aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IGB3_9BURK rbh
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:AFU48411.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora
SCNpilot_solid_1_scaffold_54_402
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

428804..429796
DNA (993bp) protein (331aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6Z7_9BURK rbh
response regulator receiver modulated metal dependent phosphohydrolase
Response regulator receiver modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:AFU48410.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
SCNpilot_solid_1_scaffold_54_403
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

429810..431489
DNA (1680bp) protein (560aa)
Twin-arginine translocation pathway signal protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSC5_9BURK rbh
twin-arginine translocation pathway signal protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
twin-arginine translocation pathway signal protein
SCNpilot_solid_1_scaffold_54_404
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(431486..432490)
DNA (1005bp) protein (335aa)
ApbE family lipoprotein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TYM6_ALIDB
apbe family lipoprotein
ApbE family lipoprotein {ECO:0000313|EMBL:ADV02035.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_solid_1_scaffold_54_405
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(432471..434675)
DNA (2205bp) protein (735aa)
Sulfite reductase [NADPH] flavoprotein alpha-component (EC:1.8.1.2)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000313|EMBL:CDM25036.1}; EC=1.8.1.2 {ECO:0000313|EMBL:CDM25036.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Bu
oxidoreductase n=1 Tax=Thiobacillus thioparus RepID=UPI00036F1270 rbh
SCNpilot_solid_1_scaffold_54_406
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(434684..435163)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD66_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34862.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
SCNpilot_solid_1_scaffold_54_407
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(435188..435580)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037F858D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00596.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_solid_1_scaffold_54_408
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(435577..436173)
DNA (597bp) protein (199aa)
Cytochrome b561 n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TV69_ALIDB
cytochrome b561
Cytochrome b561 {ECO:0000313|EMBL:ADV00601.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrifica
SCNpilot_solid_1_scaffold_54_409
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(436211..436528)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYM0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO21106.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
SCNpilot_solid_1_scaffold_54_410
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

436659..437006
DNA (348bp) protein (116aa)
Propeptide PepSY amd peptidase M4 n=2 Tax=Alicycliphilus denitrificans RepID=E8TYL9_ALIDB
propeptide PepSY amd peptidase M4
Propeptide PepSY amd peptidase M4 {ECO:0000313|EMBL:GAO21105.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycl
SCNpilot_solid_1_scaffold_54_411
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

437006..437677
DNA (672bp) protein (224aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD62_ACISJ rbh
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABM44187.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
SCNpilot_solid_1_scaffold_54_412
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

437674..439041
DNA (1368bp) protein (456aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD61_ACISJ rbh
integral membrane sensor signal transduction histidine kinase
SCNpilot_solid_1_scaffold_54_413
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

439072..439896
DNA (825bp) protein (275aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ40_9BURK rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EXU81105.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1
short-chain dehydrogenase/reductase SDR
SCNpilot_solid_1_scaffold_54_414
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(439974..441059)
DNA (1086bp) protein (362aa)
Inner membrane protein YeiH n=1 Tax=Thauera aminoaromatica S2 RepID=N6Y2K7_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EWS60498.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
inner membrane protein YeiH
SCNpilot_solid_1_scaffold_54_415
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

441171..442109
DNA (939bp) protein (313aa)
LysR family transcriptional regulator n=2 Tax=Acidovorax RepID=K0HVQ6_9BURK rbh
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:EHL23488.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor
SCNpilot_solid_1_scaffold_54_416
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(442189..442896)
DNA (708bp) protein (236aa)
Abc transporter, atp-binding protein of putative efflux system n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPG9_9GAMM rbh
ABC transporter ATP-binding protein
Abc transporter, atp-binding protein of putative efflux system {ECO:0000313|EMBL:CBL46711.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;
SCNpilot_solid_1_scaffold_54_417
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(442898..445099)
DNA (2202bp) protein (734aa)
Putative ABC-type permease n=1 Tax=uncultured bacterium RepID=Q5W384_9BACT
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
SCNpilot_solid_1_scaffold_54_418
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(445096..445713)
DNA (618bp) protein (206aa)
TetR family transcriptional regulator n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JL62_PSEST
TetR family transcriptional regulator {ECO:0000313|EMBL:EIK53202.1}; TaxID=477228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
TetR family transcriptional regulator
SCNpilot_solid_1_scaffold_54_419
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(445854..447296)
DNA (1443bp) protein (481aa)
peptidase M20 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035EB777 rbh
Peptidase m20 {ECO:0000313|EMBL:GAD21190.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
peptidase m20
SCNpilot_solid_1_scaffold_54_420
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(447283..448539)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036A442C rbh
FOG: GGDEF domain {ECO:0000313|EMBL:GAD21191.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
diguanylate cyclase
Displaying items 391-420 of 485 in total

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