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SCNpilot_solid_1_scaffold_54

Search features with annotation key words

Displaying items 121-150 of 485 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_54_121
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127099..128259)
DNA (1161bp) protein (387aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=2 Tax=Delftia acidovorans RepID=S2WDK3_DELAC rbh
SCNpilot_solid_1_scaffold_54_122
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128474..129406
DNA (933bp) protein (311aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110, ECO:0000256|SAAS:SAAS00015955}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0111
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD27_ACISJ rbh
SCNpilot_solid_1_scaffold_54_123
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129475..130509)
DNA (1035bp) protein (345aa)
methionine synthase (EC:2.1.1.13)
Methionine synthase (B12-dependent) {ECO:0000313|EMBL:ABM40338.1}; EC=2.1.1.13 {ECO:0000313|EMBL:ABM40338.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
Methionine synthase (B12-dependent) n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W263_ACISJ rbh
SCNpilot_solid_1_scaffold_54_124
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130622..132493
DNA (1872bp) protein (624aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAE3_ACIET rbh
ATP-dependent DNA helicase recq
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ACM31590.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebr
SCNpilot_solid_1_scaffold_54_125
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132724..133074
DNA (351bp) protein (117aa)
RNP-1 like RNA-binding protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNL4_POLNA
RNP-1 like RNA-binding protein
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:ABM37242.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas na
SCNpilot_solid_1_scaffold_54_126
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133226..134002)
DNA (777bp) protein (259aa)
short-chain dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003826859 rbh
Dehydrogenase {ECO:0000313|EMBL:GAD21198.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
short chain dehydrogenase
SCNpilot_solid_1_scaffold_54_127
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134002..134637)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000381A8E6
Uncharacterized protein {ECO:0000313|EMBL:GAD21199.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_solid_1_scaffold_54_128
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134634..135197)
DNA (564bp) protein (188aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family {ECO:0000313|EMBL:ADV02095.1}; EC=3.1.3.45 {ECO:0000313|EMBL:ADV02095.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteob
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family n=2 Tax=Alicycliphilus denitrificans RepID=E8TZG7_ALIDB
SCNpilot_solid_1_scaffold_54_129
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135197..136195)
DNA (999bp) protein (333aa)
KpsF/GutQ family protein (EC:5.3.1.13)
KpsF/GutQ family protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036D580D rbh
Predicted sugar phosphate isomerase involved in capsule formation {ECO:0000313|EMBL:GAD21201.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
SCNpilot_solid_1_scaffold_54_130
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136264..138246
DNA (1983bp) protein (661aa)
Sodium/hydrogen exchanger n=2 Tax=Alicycliphilus denitrificans RepID=E8TZG9_ALIDB rbh
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:AEB87026.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus d
SCNpilot_solid_1_scaffold_54_131
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138280..138834
DNA (555bp) protein (185aa)
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00004}; Short=APRT {ECO:0000255|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000255|HAMAP-Rule:MF_00004};; TaxID=232721 species="Bacteria; Prote
Adenine phosphoribosyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=APT_ACISJ rbh
SCNpilot_solid_1_scaffold_54_132
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138847..139548)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035D0A2A
Uncharacterized protein {ECO:0000313|EMBL:GAD21204.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_solid_1_scaffold_54_133
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139622..140116)
DNA (495bp) protein (165aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365054D
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases {ECO:0000313|EMBL:GAD21205.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacte
cyclic nucleotide-binding protein
SCNpilot_solid_1_scaffold_54_134
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140209..141612)
DNA (1404bp) protein (468aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Co
tRNA modification GTPase MnmE n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GCM2_ALIDK rbh
tRNA modification gtpase trme
SCNpilot_solid_1_scaffold_54_135
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141609..142856)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W2H0_ACISJ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM40445.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
SCNpilot_solid_1_scaffold_54_136
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142901..144016
DNA (1116bp) protein (372aa)
2-nitropropane dioxygenase NPD n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTY1_ALIDB rbh
2-nitropropane dioxygenase {ECO:0000313|EMBL:GAO25982.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
2-nitropropane dioxygenase
SCNpilot_solid_1_scaffold_54_137
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143994..145268)
DNA (1275bp) protein (425aa)
polymerase n=1 Tax=Acidovorax radicis RepID=UPI000237751F rbh
O-antigen polymerase Tax=GWA2_Burkholderiales_64_37_curated
O-antigen polymerase
SCNpilot_solid_1_scaffold_54_138
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145265..146038)
DNA (774bp) protein (258aa)
Glycosyl transferase, family 2 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WKR5_VEREI rbh
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABM58222.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.
SCNpilot_solid_1_scaffold_54_139
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146126..146332)
DNA (207bp) protein (69aa)
Zinc finger, CHCC-type n=2 Tax=Alicycliphilus denitrificans RepID=E8TTX6_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB82675.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_solid_1_scaffold_54_140
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146336..147274)
DNA (939bp) protein (313aa)
Branched-chain amino acid aminotransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TTX5_ALIDB rbh
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:GAD20479.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
branched-chain amino acid aminotransferase
SCNpilot_solid_1_scaffold_54_141
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147314..147715)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EAJ6_9BURK
Glycerate kinase {ECO:0000313|EMBL:EXU79269.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
hypothetical protein
SCNpilot_solid_1_scaffold_54_142
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147724..149106)
DNA (1383bp) protein (461aa)
DNA repair protein radA n=2 Tax=Alicycliphilus denitrificans RepID=E8TTX1_ALIDB rbh
DNA repair protein rada
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus d
SCNpilot_solid_1_scaffold_54_143
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149168..150265)
DNA (1098bp) protein (366aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000255|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000255|HAMAP-Rule:MF_01201};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
Alanine racemase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=ALR_ACIET rbh
SCNpilot_solid_1_scaffold_54_144
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150395..151657
DNA (1263bp) protein (421aa)
major facilitator transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E31D1 rbh
lysophospholipid transporter lplt
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:GAD20494.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source
SCNpilot_solid_1_scaffold_54_145
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151708..152589
DNA (882bp) protein (294aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036BD55B rbh
Permeases of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:GAD20495.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acid
hypothetical protein
SCNpilot_solid_1_scaffold_54_146
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152648..153313)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000369CD7E
Uncharacterized protein {ECO:0000313|EMBL:GAD20498.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
Fertility inhibition FinO-like protein
SCNpilot_solid_1_scaffold_54_147
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153410..154705)
DNA (1296bp) protein (432aa)
Ammonium transporter n=2 Tax=Alicycliphilus denitrificans RepID=E8TTU7_ALIDB
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="
SCNpilot_solid_1_scaffold_54_148
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154727..155065)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=2 Tax=Alicycliphilus denitrificans RepID=E8TTU6_ALIDB
nitrogen regulatory protein p-ii
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ADU98049.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyclip
SCNpilot_solid_1_scaffold_54_149
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155086..155817)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365265A rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD20525.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_solid_1_scaffold_54_150
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156007..157206)
DNA (1200bp) protein (400aa)
Rh family protein/ammonium transporter n=2 Tax=Thauera RepID=C4ZIU9_THASP
ammonium transporter
Ammonium transporter {ECO:0000313|EMBL:AJP47285.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
Displaying items 121-150 of 485 in total

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