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SCNpilot_solid_1_scaffold_54

Search features with annotation key words

Displaying items 91-120 of 485 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_54_91
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93041..93475
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri CCUG 29243 RepID=I4CQV4_PSEST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM32461.1}; TaxID=1196835 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutz
SCNpilot_solid_1_scaffold_54_92
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93557..94246)
DNA (690bp) protein (230aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:AEB86955.1}; EC=2.5.1.9 {ECO:0000313|EMBL:AEB86955.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
Riboflavin synthase, alpha subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBN4_ALIDK rbh
SCNpilot_solid_1_scaffold_54_93
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94320..95162
DNA (843bp) protein (281aa)
Alpha/beta hydrolase fold protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIG5_ACIET rbh
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ACM34903.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax e
SCNpilot_solid_1_scaffold_54_94
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95195..95902)
DNA (708bp) protein (236aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
16S rRNA methyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000362171C rbh
hypothetical protein
SCNpilot_solid_1_scaffold_54_95
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95957..97150)
DNA (1194bp) protein (398aa)
Aminoglycoside phosphotransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBT9_ALIDK rbh
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AEB87010.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
SCNpilot_solid_1_scaffold_54_96
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97153..99534
DNA (2382bp) protein (794aa)
LPS-assembly protein LptD n=2 Tax=Acidovorax sp. (strain JS42) RepID=LPTD_ACISJ rbh
LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sourc
organic solvent tolerance protein
SCNpilot_solid_1_scaffold_54_97
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99594..101003
DNA (1410bp) protein (470aa)
Chaperone SurA n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TYR7_ALIDB rbh
sura domain-containing protein
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01
SCNpilot_solid_1_scaffold_54_98
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


101011..101784
DNA (774bp) protein (258aa)
Chaperone SurA {ECO:0000256|SAAS:SAAS00043023}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00275485};; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobac
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Alicycliphilus denitrificans RepID=E8TYR6_ALIDB rbh
dimethyladenosine transferase
SCNpilot_solid_1_scaffold_54_99
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102074..102493)
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1WD85_ACISJ
barstar (barnase inhibitor)
Uncharacterized protein {ECO:0000313|EMBL:ABM44210.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
SCNpilot_solid_1_scaffold_54_100
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102616..103017)
DNA (402bp) protein (134aa)
Guanine-specific ribonuclease N1 and T1 n=2 Tax=Acidovorax RepID=A1WD84_ACISJ
guanine-specific ribonuclease n1 and t1
Guanine-specific ribonuclease N1 and T1 {ECO:0000313|EMBL:ACM34892.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovora
SCNpilot_solid_1_scaffold_54_101
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103182..105515)
DNA (2334bp) protein (778aa)
malic enzyme (EC:1.1.1.40)
malic enzyme n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035D4F28 rbh
Malic enzyme {ECO:0000313|EMBL:GAD21176.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_solid_1_scaffold_54_102

Not on your lists

comp(105898..106086)
DNA (189bp) protein (63aa)
Transposase IS4 family protein n=1 Tax=mine drainage metagenome RepID=T0Y1B6_9ZZZZ
Transposase IS4 family protein {ECO:0000313|EMBL:EQD75782.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
IS4 family transposase
SCNpilot_solid_1_scaffold_54_103
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106268..107173
DNA (906bp) protein (302aa)
Prophage antirepressor n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RJ9_RHOFD
prophage antirepressor
Prophage antirepressor {ECO:0000313|EMBL:ABD71604.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducen
SCNpilot_solid_1_scaffold_54_104
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107644..109821
DNA (2178bp) protein (726aa)
ATP-dependent DNA helicase DinG n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003706342 rbh
Rad3-related DNA helicases {ECO:0000313|EMBL:GAD21232.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-
helicase c2
SCNpilot_solid_1_scaffold_54_105
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109830..110582
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375216
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AFU43940.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_solid_1_scaffold_54_106
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110684..110935)
DNA (252bp) protein (84aa)
transglycosylase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395AE42
transglycosylase-associated protein
Transglycosylase-associated protein {ECO:0000313|EMBL:ABM33399.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
SCNpilot_solid_1_scaffold_54_107
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111032..112231
DNA (1200bp) protein (400aa)
Putative lipoprotein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDX9_METPP
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABM93768.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).
SCNpilot_solid_1_scaffold_54_108
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112288..113295
DNA (1008bp) protein (336aa)
(2Fe-2S)-binding protein n=1 Tax=Acidovorax avenae RepID=UPI000364EC59 rbh
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ABX34783.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovoran
SCNpilot_solid_1_scaffold_54_109
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113348..114007
DNA (660bp) protein (220aa)
TetR family transcriptional regulator n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WXM4_9BURK
Putative HTH-type transcriptional regulator YvdT {ECO:0000313|EMBL:EWS64945.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;"
transcriptional regulator, TetR family
SCNpilot_solid_1_scaffold_54_110
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

114162..115019
DNA (858bp) protein (286aa)
Putative meta-cleavage compound hydrolase n=1 Tax=Gordonia sputi NBRC 100414 RepID=H5TWR5_9ACTO
alpha/beta hydrolase family protein
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:AHH18488.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
SCNpilot_solid_1_scaffold_54_111
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

115152..116093
DNA (942bp) protein (314aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WVJ8_KYRT2
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADG07541.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tu
SCNpilot_solid_1_scaffold_54_112
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116095..117678
DNA (1584bp) protein (528aa)
monooxygenase n=1 Tax=Burkholderia sp. JPY251 RepID=UPI00036ECE56 rbh
FAD binding domain protein
FAD binding domain protein {ECO:0000313|EMBL:AIO35166.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia compl
SCNpilot_solid_1_scaffold_54_113
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117689..118561
DNA (873bp) protein (291aa)
Ureidoglycolate lyase (EC:4.3.2.3)
Ureidoglycolate lyase {ECO:0000313|EMBL:ADX57769.1}; EC=4.3.2.3 {ECO:0000313|EMBL:ADX57769.1};; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; B
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036FF5CD rbh
SCNpilot_solid_1_scaffold_54_114
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118755..119918
DNA (1164bp) protein (388aa)
Bll6424 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89GC1_BRADU rbh
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:KEA63092.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;
hypothetical protein
SCNpilot_solid_1_scaffold_54_115
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120124..122865
DNA (2742bp) protein (914aa)
methionine synthase (EC:2.1.1.13)
Methionine synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TT21_ALIDB rbh
5-methyltetrahydrofolate-homocysteine methyltransferase {ECO:0000313|EMBL:GAO21597.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphi
SCNpilot_solid_1_scaffold_54_116
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122862..123872
DNA (1011bp) protein (337aa)
UDP-glucose 4-epimerase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZW0_9GAMM
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EIL92751.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
UDP-glucose 4-epimerase
SCNpilot_solid_1_scaffold_54_117
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123835..124626)
DNA (792bp) protein (264aa)
Cyclic-AMP phosphodiesterase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAW5_ALIDK rbh
cyclic-AMP phosphodiesterase
Cyclic-AMP phosphodiesterase {ECO:0000313|EMBL:AEB86903.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilu
SCNpilot_solid_1_scaffold_54_118
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124643..125263)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F4F4D
FOG: FHA domain {ECO:0000313|EMBL:GAD22885.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
FHA domain-containing protein
SCNpilot_solid_1_scaffold_54_119
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125287..126090)
DNA (804bp) protein (268aa)
Protein serine/threonine phosphatase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAW7_ALIDK
protein phosphatase 2C
Protein phosphatase 2C-like protein {ECO:0000313|EMBL:ADV01964.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
SCNpilot_solid_1_scaffold_54_120
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126190..127083)
DNA (894bp) protein (298aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkh
succinyl-CoA synthetase subsunit alpha n=1 Tax=Bordetella sp. FB-8 RepID=UPI000364A87C rbh
succinyl-CoA synthetase subunit alpha
Displaying items 91-120 of 485 in total

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