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SCNpilot_solid_1_scaffold_54_109

Organism: SCNPILOT_SOLID_1_Burkholderiales_65_210

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 113348..114007

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WXM4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 36.7
  • Coverage: 199.0
  • Bit_score: 120
  • Evalue 2.40e-24
Putative HTH-type transcriptional regulator YvdT {ECO:0000313|EMBL:EWS64945.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 215.0
  • Bit_score: 321
  • Evalue 7.70e-85
transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 206.0
  • Bit_score: 113
  • Evalue 1.10e-22

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Taxonomy

Hydrogenophaga sp. T4 → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGCCAGACCAGCCCAAGCCCAAGCCCCAAAGAGCTGTTCATCCCAGGACGGCCAGCGGGCAGGCCCGGAAAGCCCGCACGCGCGCAGCCATCATCGAGGCAGCGATCCCGGTATTCGCTCGCCACGGACCGGACATCCCGGTCATCGACGATTTCGTGAAGGCGGCGGGCATTTCTCGAGGCACGTTCTACAACTACTTCCAGACCACCCGGGAGCTGCTGGAGGCGGCGATGGCCTGCATCTCGGACGAGCTGATCGAAACCATCATCCCGGCGGTCGCCGACGAGCCCAACCCCGTCATCCGCTTTGCCACTGCGGCGCGGCTGTTCTACCGCAAGGCCAGGCTCGATCCAGTGTTCAGGGCCTTTTTCAACTCGGTTTCCGGCGTCGGCAGCCTGGCGATGCAGCGTGCCCACGCCGATATGGTGGAGGCCATCGATCTGGGCCTGGTCAAGGTCAGGGACATCGAGCTGGCCGACGCGATCGCTTTCGGCGTGATGGTGTTTGCCCTGCGAGCCTCCGACGTGGAGGCAAGCGGCCAGGAACGCACCCGGGAGGTGGTGCGCGCCATGCTGAATGCGCTGGGCGTGGCGCCCGAGCTGATTGACCAGGCTTTGAAAGTTCCATTGCCGCCTGTTGTTCCATCGAGCCAGGTTTGA
PROTEIN sequence
Length: 220
MPDQPKPKPQRAVHPRTASGQARKARTRAAIIEAAIPVFARHGPDIPVIDDFVKAAGISRGTFYNYFQTTRELLEAAMACISDELIETIIPAVADEPNPVIRFATAARLFYRKARLDPVFRAFFNSVSGVGSLAMQRAHADMVEAIDLGLVKVRDIELADAIAFGVMVFALRASDVEASGQERTREVVRAMLNALGVAPELIDQALKVPLPPVVPSSQV*