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SCNpilot_solid_1_scaffold_54_96

Organism: SCNPILOT_SOLID_1_Burkholderiales_65_210

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 97153..99534

Top 3 Functional Annotations

Value Algorithm Source
LPS-assembly protein LptD n=2 Tax=Acidovorax sp. (strain JS42) RepID=LPTD_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 799.0
  • Bit_score: 1057
  • Evalue 0.0
  • rbh
LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 799.0
  • Bit_score: 1057
  • Evalue 0.0
organic solvent tolerance protein similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 791.0
  • Bit_score: 1055
  • Evalue 0.0

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Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2382
GTGCCACCACCCCTGTCCCCGCCGCCTTGCCGCCTGCCAAGCCTGGTCTGCGCCGGACTGCTGGTCTGCGCCCAGGCGCTCGCCCAGCAGGATGGCCCGCTGCCCGCCGCGGCGCTGCAAGCCTCGCCGCAGCTGGCGGAAAAGGCGCCCACGCCGCCCTCCGCCCTGCCCACCTTCGTGCGCGGCGAGCGCATCGAGGGGCAGACCGACGTGCAGATCAACATCCAGGGCGATGCCGAGCTGCGCCGCGGCGACACCGTGATCCATGCGGACCGCATGGACTACGACATCCCCGAGGACCGCGCGCGCGCCAGCGGCCATGTGCGCATCAACCGCGGCGGCAACCTCTACGACGGCCAGCTGCTCGATCTCAAGGTCAACGCCTTCAACGGCTTCTTCACGCAGATCGACTACCGGCTGCTGCAGACGGGCGGCCACGGCGTGGCCAGCCGCGTGGACTTCATCGACCACGACCATTCGGTCTCGCACGACGCGACCTACACCACCTGCGAGAAGGACAACGAAGCCAGCTGGCAGCCCGACTGGGTGCTGCGCGCCGAGACGCTGACGATAGACAAGGTGCAGGACGAGGGCGTCGCCACCAACGCCGTGCTGGAATTCAAGGGCGTGCCCATCCTGGCAACGCCCTGGGTCAGCTTCCCGCTGTCCAACCAGCGCAAGTCCGGGCTGCTGCCGCCCACGCTGGCGCTGGACAGCACCAGCGGCTTCGTCTACGCCCAGCCGTATTACTGGAACATCGCGCCCAACCGCGACGCCACCTTCACGCCGGTGCTGATGTCGCGCCGCGGTGTCGCGCTCAATTCGGAGTTCCGCTACCTGGAGCCGCGCTACAACGGCGAGCTGGGGCTGAATTTCATGCCGACGGACAAGCTGCGCGATCGCAACCGCTGGCTGGGCAGCATCAAGCACAGCGCGCAAATCGCCTCGCCCCTGGGCGATCTGGGCCTGGGAATCAACATCCGCCGCGCCAGCGACAACAATTACTGGCGCGATTTCCCCCAGCGCGGCACCAGCGGCACCAACCCGCTGGACACCACCGCGCAGCGGCTGCTGGCGGCCGATGGCAGCCTGCACTGGTCCCGGGGCAACAACGCGGTGAGCCTGCGCACCCTCAAGTGGCAGACGCTGCAGGACGTGACATCGCCGATCACGCCGCCCTACGACCTGCTGCCGCAATTGCACTGGGCCTACACGCCCGACAGCGTCGGCCCGGGGCTGGACCTGCGCCTGGATGGCGACTACACCCATTTCCGCGGCGATCGCAGCTTCTACACCCAGCCGAATGCCGCGCGCAGCTATTTCATCGCCCAGCTCAGCCGTCCCTGGCTCACGCCGGCGAGTTTCATCACGCCGCGCCTGCAGCTGCACGCCACGCGCTACCAGTTCGACACGCCGCTCTCCACGGGGCAGACGGGCATCACCCGGGTATTGCCCACCTTCAGCCTCGACAGCGGCCTGGTCTTCGAGCGCGATGCGGCGTACCTCGGCCGCGGCTTCGTGCAGACGCTGGAGCCACGCGCCTTCTACACCTTCACGCCGCACCACAACCAGAGCATGCTGCCGGTGTACGACACGGCGCAGACCGACTTCAACTTCGCCTCCATCTATACCGAAAACTCGTTTGGCGGCAACGACCGCATCGCCGACAACAACCTGCTGACGCTGGGTGTGACCACGCGGCTGCTGGACCCGGGCAGCGGCGCCGAGGCCGTGCGCCTGGGCGTGGCGCAGCGCCTGCGCTTTTCCGACCAGACCGTGACCATGCCCGGCCAGCCCGTGGTGAGCGAGCACCTGTCGGACATCCTGCTGGGCGCGGGCATCCATTGGGTGCCCGAGTGGGGCTTTGACTCCACCATCCAGTACAACCCCAAGCAGGGCCAGTCGCTGCGCACCACCATCGCCGCGCGCTACACCCCGGCCAAATACCACACGCTCAGCGTCGCCTACCGCAAGCAGGATGTGACTGGCCCCTTCACCGTGGCCAGCAAGCAGCTGGACCTGGGCTGGCAATGGCCGCTCTCGGACGTGTTTGGATCGTCCAGAGACAGCCAGGCGGGACGGGACGGGCGCTGGTACAGCGTCGGGCGCCTGAACTACAGCCTGCAGGACCGCAAGCTGACGGACGCCATCATCGGCGCCGAATACGACAGCTGCTGCTGGACCGGCCGCGTGGTGCTGGAGCGCCTGCAAATGGGCGCCACCACCTCGAACACGCGCATCCTGCTGCAGCTTGAGCTCAAGGGCCTGTCGCGCCTGTCGTTCGGCAACAACCCGCTGGCCAGCCTGCAGCAGAACGTGCCGGGCTACCAGGTTCTGGACAGCCGCCAAACCACCCCCAGCCGCTTCACCCGCTACGATTGA
PROTEIN sequence
Length: 794
VPPPLSPPPCRLPSLVCAGLLVCAQALAQQDGPLPAAALQASPQLAEKAPTPPSALPTFVRGERIEGQTDVQINIQGDAELRRGDTVIHADRMDYDIPEDRARASGHVRINRGGNLYDGQLLDLKVNAFNGFFTQIDYRLLQTGGHGVASRVDFIDHDHSVSHDATYTTCEKDNEASWQPDWVLRAETLTIDKVQDEGVATNAVLEFKGVPILATPWVSFPLSNQRKSGLLPPTLALDSTSGFVYAQPYYWNIAPNRDATFTPVLMSRRGVALNSEFRYLEPRYNGELGLNFMPTDKLRDRNRWLGSIKHSAQIASPLGDLGLGINIRRASDNNYWRDFPQRGTSGTNPLDTTAQRLLAADGSLHWSRGNNAVSLRTLKWQTLQDVTSPITPPYDLLPQLHWAYTPDSVGPGLDLRLDGDYTHFRGDRSFYTQPNAARSYFIAQLSRPWLTPASFITPRLQLHATRYQFDTPLSTGQTGITRVLPTFSLDSGLVFERDAAYLGRGFVQTLEPRAFYTFTPHHNQSMLPVYDTAQTDFNFASIYTENSFGGNDRIADNNLLTLGVTTRLLDPGSGAEAVRLGVAQRLRFSDQTVTMPGQPVVSEHLSDILLGAGIHWVPEWGFDSTIQYNPKQGQSLRTTIAARYTPAKYHTLSVAYRKQDVTGPFTVASKQLDLGWQWPLSDVFGSSRDSQAGRDGRWYSVGRLNYSLQDRKLTDAIIGAEYDSCCWTGRVVLERLQMGATTSNTRILLQLELKGLSRLSFGNNPLASLQQNVPGYQVLDSRQTTPSRFTRYD*