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SCNpilot_solid_1_scaffold_54

Search features with annotation key words

Displaying items 211-240 of 485 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_54_211
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(225988..226314)
DNA (327bp) protein (109aa)
NIPSNAP superfamily n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6ATW1_9RHOB
NIPSNAP superfamily {ECO:0000313|EMBL:EDZ41735.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC2083
NIPSNAP family containing protein
SCNpilot_solid_1_scaffold_54_212
unknown

Not on your lists

226852..227058
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_54_213
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227592..227885)
DNA (294bp) protein (98aa)
XRE family transcriptional regulator n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003622A4A
Cro/Ci family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
plasmid maintenance system antidote protein
SCNpilot_solid_1_scaffold_54_214
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227885..228163)
DNA (279bp) protein (93aa)
Plasmid maintenance system killer protein n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JIM2_PSEST
plasmid maintenance system killer protein; K07334 proteic killer suppression protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
addiction module killer protein
SCNpilot_solid_1_scaffold_54_215
Shewanella putrefaciens, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(228284..228589)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) RepID=A4Y4V7_SHEPC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP74990.1}; TaxID=319224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella putrefacie
SCNpilot_solid_1_scaffold_54_216
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(229178..230212)
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3N6E3_KLEOX rbh
Uncharacterized protein {ECO:0000313|EMBL:EHT08611.1}; TaxID=883125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxyt
hypothetical protein
SCNpilot_solid_1_scaffold_54_217

Not on your lists

232575..232847
DNA (273bp) protein (91aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=U8BXI8_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CDL74570.1}; TaxID=1449437 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA phages.;" source="Pseudomonas phage vB_PaeP_Tr60_Ab31.;"
hypothetical protein
SCNpilot_solid_1_scaffold_54_218
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

233280..234293
DNA (1014bp) protein (338aa)
Integron integrase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJI9_THIDA rbh
integron integrase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
integron integrase
SCNpilot_solid_1_scaffold_54_219
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(234331..234666)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNQ6_9GAMM
hypothetical protein
hypothetical protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
SCNpilot_solid_1_scaffold_54_220
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(234653..234946)
DNA (294bp) protein (98aa)
toxin n=1 Tax=Methyloversatilis universalis RepID=UPI00036AB9EB
hypothetical protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
hypothetical protein
SCNpilot_solid_1_scaffold_54_221
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(235021..235890)
DNA (870bp) protein (290aa)
Glutamine amidotransferase class-II n=2 Tax=Alicycliphilus denitrificans RepID=E8TVF6_ALIDB rbh
glutamine amidotransferase
Glutamine amidotransferase class-II {ECO:0000313|EMBL:AEB86754.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
SCNpilot_solid_1_scaffold_54_222
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

236040..237614
DNA (1575bp) protein (525aa)
pntA; NAD(P) transhydrogenase subunit alpha (EC:1.6.1.2) Tax=GWA2_Burkholderiales_64_37_curated
NAD(P) transhydrogenase subunit alpha n=1 Tax=Acidovorax radicis RepID=UPI00023751E5 rbh
NAD(P) transhydrogenase subunit alpha
SCNpilot_solid_1_scaffold_54_223
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

237645..239060
DNA (1416bp) protein (472aa)
nad(p)(+) transhydrogenase (ab-specific) (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD(P) transhydrogenase subunit beta n=2 Tax=Alicycliphilus denitrificans RepID=E8TW83_ALIDB rbh
SCNpilot_solid_1_scaffold_54_224
unknown

Not on your lists

239014..240063
DNA (1050bp) protein (350aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_54_225
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

240057..240887
DNA (831bp) protein (277aa)
AMP-dependent synthetase and ligase n=2 Tax=Alicycliphilus denitrificans RepID=E8TW82_ALIDB
AMP-dependent synthetase/ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADV01856.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
SCNpilot_solid_1_scaffold_54_226
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

240908..241648
DNA (741bp) protein (247aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {E
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4T1_9BURK rbh
SCNpilot_solid_1_scaffold_54_227

Not on your lists

241779..242582
DNA (804bp) protein (268aa)
Putative enoyl-CoA hydratase/isomerase n=1 Tax=uncultured bacterium RepID=B3F475_9BACT rbh
Putative enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABW35795.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
unsaturated acyl-CoA hydratase
SCNpilot_solid_1_scaffold_54_228
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

242626..244503
DNA (1878bp) protein (626aa)
Long-chain-fatty-acid--CoA ligase-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y2Q3_RAMTT rbh
long-chain-fatty-acid--CoA ligase
Long-chain-fatty-acid--CoA ligase-like protein {ECO:0000313|EMBL:AEG93599.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source
SCNpilot_solid_1_scaffold_54_229
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

244590..245837
DNA (1248bp) protein (416aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=GWE1_Burkholderiales_65_30_curated
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase id=1261917 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
SCNpilot_solid_1_scaffold_54_230
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

245909..246673
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKD9_POLNA rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABM36117.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polar
SCNpilot_solid_1_scaffold_54_231
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

246778..247188
DNA (411bp) protein (137aa)
Thioesterase superfamily n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128L3_POLSJ
thioesterase superfamily protein
Thioesterase superfamily {ECO:0000313|EMBL:ABE45029.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (str
SCNpilot_solid_1_scaffold_54_232
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

247243..248382
DNA (1140bp) protein (380aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKE1_POLNA rbh
extracellular ligand-binding receptor
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABM36119.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholder
SCNpilot_solid_1_scaffold_54_233
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

248443..250146
DNA (1704bp) protein (568aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002EC37F4 rbh
Acyl-CoA dehydrogenase-like protein {ECO:0000313|EMBL:EHL24057.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
acyl-CoA dehydrogenase-like protein
SCNpilot_solid_1_scaffold_54_234
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

250143..250625
DNA (483bp) protein (161aa)
MarR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377181
marR family transcriptional regulator Tax=GWA2_Burkholderiales_64_37_curated
MarR family transcriptional regulator
SCNpilot_solid_1_scaffold_54_235
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250639..251625)
DNA (987bp) protein (329aa)
Magnesium and cobalt transport protein CorA n=2 Tax=Alicycliphilus denitrificans RepID=E8TW78_ALIDB rbh
magnesium and cobalt transport protein CorA
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycl
SCNpilot_solid_1_scaffold_54_236
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(251772..252452)
DNA (681bp) protein (227aa)
Phage SPO1 DNA polymerase-related protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9D4_ALIDK
Phage SPO1 DNA polymerase-like protein {ECO:0000313|EMBL:GAO25447.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
phage SPO1 DNA polymerase-like protein
SCNpilot_solid_1_scaffold_54_237
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(252449..252913)
DNA (465bp) protein (155aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TD51_ACIDE
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EER57596.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
ribosomal-protein-alanine acetyltransferase
SCNpilot_solid_1_scaffold_54_238
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(252910..253611)
DNA (702bp) protein (234aa)
Peptidase M22, glycoprotease n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WCS1_ACISJ rbh
peptidase M22, glycoprotease
Peptidase M22, glycoprotease {ECO:0000313|EMBL:ABM44046.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (s
SCNpilot_solid_1_scaffold_54_239
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

253646..255079
DNA (1434bp) protein (478aa)
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:ACM34717.1}; EC=3.4.16.4 {ECO:0000313|EMBL:ACM34717.1};; TaxID=535289 species="Bacteria; Proteobacteria; Betaprot
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHK8_ACIET rbh
SCNpilot_solid_1_scaffold_54_240
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

255132..256241
DNA (1110bp) protein (370aa)
phospholipase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036A66B5 rbh
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:GAD23365.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s
G-D-S-L family lipolytic protein
Displaying items 211-240 of 485 in total

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