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SCNpilot_solid_1_scaffold_56

Search features with annotation key words

Displaying items 121-150 of 486 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_56_120
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108952..109260)
DNA (309bp) protein (103aa)
NADH-quinone oxidoreductase subunit K n=4 Tax=Acidovorax RepID=K0I212_9BURK
NAD(P)H-quinone oxidoreductase subunit 4L
NAD(P)H-quinone oxidoreductase subunit 4L Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_solid_1_scaffold_56_121
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109257..109934)
DNA (678bp) protein (226aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MEM3_ACIET
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 {ECO:0000313|EMBL:ACM32359.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
SCNpilot_solid_1_scaffold_56_122
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109964..110476)
DNA (513bp) protein (171aa)
NADH-quinone oxidoreductase subunit i (EC:1.6.99.3)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit
NADH-quinone oxidoreductase subunit I n=2 Tax=Alicycliphilus denitrificans RepID=E8U1L5_ALIDB rbh
SCNpilot_solid_1_scaffold_56_123
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110492..111568)
DNA (1077bp) protein (359aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit
NADH-quinone oxidoreductase subunit H n=2 Tax=Alicycliphilus denitrificans RepID=E8U1L4_ALIDB rbh
SCNpilot_solid_1_scaffold_56_124
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111565..113703)
DNA (2139bp) protein (713aa)
NADH dehydrogenase subunit G n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F8EAB rbh
NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit {ECO:0000313|EMBL:GAD20733.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Aci
NADH dehydrogenase subunit g
SCNpilot_solid_1_scaffold_56_125
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113719..115068)
DNA (1350bp) protein (450aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH-quinone oxidoreductase, F subunit {ECO:0000313|EMBL:ADU98816.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ADU98816.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
NADH-quinone oxidoreductase, F subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G4B8_ALIDK rbh
SCNpilot_solid_1_scaffold_56_126
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115065..115556)
DNA (492bp) protein (164aa)
NADH-quinone oxidoreductase, E subunit {ECO:0000313|EMBL:AEB86333.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AEB86333.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
NADH-quinone oxidoreductase, E subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8U1L1_ALIDB
NADH-quinone oxidoreductase, e subunit
SCNpilot_solid_1_scaffold_56_127
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115553..116806)
DNA (1254bp) protein (418aa)
NADH dehydrogenase subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
NADH-quinone oxidoreductase subunit D n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWH0_9BURK rbh
SCNpilot_solid_1_scaffold_56_128
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116806..117447)
DNA (642bp) protein (214aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit
NADH dehydrogenase subunit C n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003768BBB rbh
NADH (or f420h2) dehydrogenase, subunit c
SCNpilot_solid_1_scaffold_56_129
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117461..117940)
DNA (480bp) protein (160aa)
NADH dehydrogenase subunit B (EC:1.6.99.3)
NADH-quinone oxidoreductase subunit B {ECO:0000255|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000255|HAMAP-Rule:MF_01356}; NDH-1 subunit
NADH-quinone oxidoreductase subunit B n=2 Tax=Acidovorax RepID=NUOB_ACIET rbh
SCNpilot_solid_1_scaffold_56_130
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117965..118324)
DNA (360bp) protein (120aa)
NADH-quinone oxidoreductase subunit A {ECO:0000255|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000255|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-quinone oxidoreductase subunit A n=1 Tax=Acidovorax sp. (strain JS42) RepID=NUOA_ACISJ
NADH-ubiquinone/plastoquinone oxidoreductase subunit 3
SCNpilot_solid_1_scaffold_56_trna_5
unknown

Not on your lists

comp(118395..118476)
DNA (82bp)
transferRNA
SCNpilot_solid_1_scaffold_56_131
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118505..118894)
DNA (390bp) protein (130aa)
Preprotein translocase, SecG subunit n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MEL3_ACIET
preprotein translocase subunit SecG
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ACM32349.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora
SCNpilot_solid_1_scaffold_56_132
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118929..119687)
DNA (759bp) protein (253aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MEL2_ACIET
SCNpilot_solid_1_scaffold_56_133
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119704..120690)
DNA (987bp) protein (329aa)
NAD(P)H quinone oxidoreductase (EC:1.6.5.5)
NAD(P)h quinone oxidoreductase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1Z3_9BURK rbh
NAD(P)h quinone oxidoreductase {ECO:0000313|EMBL:EHL21318.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
SCNpilot_solid_1_scaffold_56_134
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120772..123027)
DNA (2256bp) protein (752aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=596153
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8U1K3_ALIDB rbh
SCNpilot_solid_1_scaffold_56_135
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(123244..123510)
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00036ED7CE
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidov
SCNpilot_solid_1_scaffold_56_136
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123794..124057
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:ADX45197.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
SCNpilot_solid_1_scaffold_56_trna_1
unknown

Not on your lists

124138..124211
DNA (74bp)
transferRNA
SCNpilot_solid_1_scaffold_56_137
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124627..124965)
DNA (339bp) protein (113aa)
CutA1 divalent ion tolerance protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T443_ACIDE
CutA1 divalent ion tolerance protein {ECO:0000313|EMBL:EER60778.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora
cuta1 divalent ion tolerance protein
SCNpilot_solid_1_scaffold_56_138
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125070..126011
DNA (942bp) protein (314aa)
RNA polymerase sigma factor RpoH n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF09_ACIET rbh
RNA polymerase sigma-32 subunit RpoH
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria;
SCNpilot_solid_1_scaffold_56_139
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126042..126674)
DNA (633bp) protein (211aa)
photosynthetic protein synthase I n=1 Tax=Acidovorax avenae RepID=UPI0002FF49B3
electron transport protein SCO1/SenC; K07152 Tax=GWA2_Burkholderiales_64_37_curated
electron transport protein SCO1/SenC
SCNpilot_solid_1_scaffold_56_140
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126674..127600)
DNA (927bp) protein (309aa)
Protoheme IX farnesyltransferase {ECO:0000255|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000255|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000255|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
Protoheme IX farnesyltransferase n=2 Tax=Acidovorax RepID=COXX_ACIET rbh
protoheme ix farnesyltransferase
SCNpilot_solid_1_scaffold_56_141
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127597..128790)
DNA (1194bp) protein (398aa)
cytochrome oxidase assembly protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003725A86 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD23671.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
cytochrome oxidase assembly
SCNpilot_solid_1_scaffold_56_142
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128799..129530)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBL7_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM43642.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
SCNpilot_solid_1_scaffold_56_143
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129472..130248)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036DD78C
Uncharacterized protein {ECO:0000313|EMBL:GAD23673.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
cytochrome oxidase
SCNpilot_solid_1_scaffold_56_144
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130263..130487
DNA (225bp) protein (75aa)
Putative transmembrane protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBL9_ACISJ
hypothetical protein
Putative transmembrane protein {ECO:0000313|EMBL:ACM34288.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sour
SCNpilot_solid_1_scaffold_56_145
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130570..131451)
DNA (882bp) protein (294aa)
MFS transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000382345E rbh
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:GAD23675.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s
cytochrome c oxidase subunit III
SCNpilot_solid_1_scaffold_56_146
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131507..131701)
DNA (195bp) protein (65aa)
cytochrome C oxidase assembly protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377A18
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34290.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (str
SCNpilot_solid_1_scaffold_56_147
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131698..132294)
DNA (597bp) protein (199aa)
Cytochrome c oxidase assembly protein CtaG/Cox11 n=2 Tax=Alicycliphilus denitrificans RepID=E8U1F1_ALIDB
cytochrome c oxidase assembly protein ctag/cox11
Cytochrome c oxidase assembly protein CtaG/Cox11 {ECO:0000313|EMBL:AEB86276.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" s
Displaying items 121-150 of 486 in total

View Taxonomy