ggKbase home page

SCNpilot_solid_1_scaffold_56

Search features with annotation key words

Displaying items 91-120 of 486 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_56_90
Shewanella loihica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78524..78844
DNA (321bp) protein (107aa)
Cytochrome c, class I n=1 Tax=Shewanella loihica (strain ATCC BAA-1088 / PV-4) RepID=A3QIG6_SHELP
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:ABO25264.1}; Flags: Precursor;; TaxID=323850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shew
SCNpilot_solid_1_scaffold_56_91
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79042..81036
DNA (1995bp) protein (665aa)
Acetyl-coenzyme A synthetase n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YAF0_9BURK rbh
acetate--CoA ligase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_solid_1_scaffold_56_92
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81109..82110
DNA (1002bp) protein (334aa)
peptidase S58 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003615FA2 rbh
L-aminopeptidase/D-esterase {ECO:0000313|EMBL:GAD24804.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR
peptidase S58, DmpA
SCNpilot_solid_1_scaffold_56_93
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82101..82934)
DNA (834bp) protein (278aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase id=12550248 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
CDP-diacylglycerol--serine O-phosphatidyltransferase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_solid_1_scaffold_56_94
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83082..84098)
DNA (1017bp) protein (339aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
ketol-acid reductoisomerase (EC:1.1.1.86)
ketol-acid reductoisomerase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037C961F
SCNpilot_solid_1_scaffold_56_95
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84133..84624)
DNA (492bp) protein (164aa)
ilvH; acetolactate synthase 3 regulatory subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=2 Tax=Acidovorax RepID=A1W6T3_ACISJ
Acetolactate synthase {ECO:0000313|EMBL:KJA11657.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
SCNpilot_solid_1_scaffold_56_96
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84759..86552)
DNA (1794bp) protein (598aa)
acetolactate synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003662072 rbh
Acetolactate synthase 3 catalytic subunit {ECO:0000313|EMBL:GAD21659.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
acetolactate synthase 3 catalytic subunit
SCNpilot_solid_1_scaffold_56_97
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86644..87408
DNA (765bp) protein (255aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QAP0_ACIAP
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADX46081.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source
SCNpilot_solid_1_scaffold_56_98
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87405..87860
DNA (456bp) protein (152aa)
Putative transmembrane protein n=2 Tax=Acidovorax RepID=A1W6T0_ACISJ
hypothetical protein
Putative transmembrane protein {ECO:0000313|EMBL:ACM33411.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebre
SCNpilot_solid_1_scaffold_56_99
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87888..88844
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0B0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45630.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
SCNpilot_solid_1_scaffold_56_100
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88960..89421
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036E86DC
Predicted membrane protein/domain {ECO:0000313|EMBL:GAD21663.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
RDD domain-containing protein
SCNpilot_solid_1_scaffold_56_101
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89443..89826
DNA (384bp) protein (128aa)
Diacylglycerol kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWI4_ALIDB
diacylglycerol kinase
Diacylglycerol kinase {ECO:0000313|EMBL:ADU99507.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denit
SCNpilot_solid_1_scaffold_56_102
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89831..90424
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037421C8 rbh
Predicted Rossmann fold nucleotide-binding protein {ECO:0000313|EMBL:GAD21665.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
hypothetical protein
SCNpilot_solid_1_scaffold_56_103
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90425..90763)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=2 Tax=Alicycliphilus denitrificans RepID=E8TWI2_ALIDB
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:AEB85480.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyclip
SCNpilot_solid_1_scaffold_56_104
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90860..92056
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000379F661 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD21668.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_solid_1_scaffold_56_105
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92079..92615)
DNA (537bp) protein (179aa)
inorganic diphosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=397945 species="Bac
Inorganic pyrophosphatase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TQK3_ACIAC
SCNpilot_solid_1_scaffold_56_106
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92858..94924
DNA (2067bp) protein (689aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
v-type h(+)-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVD6_9BURK rbh
SCNpilot_solid_1_scaffold_56_107
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95052..95759)
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RU68_COMTE
Calcium-binding protein {ECO:0000313|EMBL:KGG90564.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Ps
calcium-binding protein
SCNpilot_solid_1_scaffold_56_108
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(95851..96336)
DNA (486bp) protein (162aa)
Hemerythrin HHE cation binding domain protein n=1 Tax=uncultured bacterium A1Q1_fos_2116 RepID=L7VW61_9BACT
Hemerythrin {ECO:0000313|EMBL:EWT05893.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
SCNpilot_solid_1_scaffold_56_109
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96516..97214)
DNA (699bp) protein (233aa)
cAMP-binding protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EMD6_9BURK
cAMP-binding protein {ECO:0000313|EMBL:EJE53344.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
crp; CRP family transcriptional regulator
SCNpilot_solid_1_scaffold_56_110
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97287..98102
DNA (816bp) protein (272aa)
enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036CA91B rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:KIZ39535.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palus
SCNpilot_solid_1_scaffold_56_111
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98435..98710
DNA (276bp) protein (92aa)
kynU; kynureninase KynU (EC:3.7.1.3)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-R
Kynureninase n=1 Tax=Variovorax paradoxus B4 RepID=T1X7Y4_VARPD
SCNpilot_solid_1_scaffold_56_112
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98895..100295)
DNA (1401bp) protein (467aa)
Fumarate lyase n=1 Tax=Comamonas testosteroni S44 RepID=D8D0E3_COMTE rbh
Fumarate lyase {ECO:0000313|EMBL:EFI63518.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
fumarate lyase
SCNpilot_solid_1_scaffold_56_113
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100462..101334)
DNA (873bp) protein (291aa)
aromatic ring-cleaving dioxygenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036483FD rbh
extradiol ring-cleavage dioxygenase class IIi protein subunit b
Extradiol ring-cleavage dioxygenase class III protein subunit B {ECO:0000313|EMBL:ACM33092.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acid
SCNpilot_solid_1_scaffold_56_114
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101416..102300
DNA (885bp) protein (295aa)
CoA transferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000366B58F rbh
Predicted acyl-CoA transferases/carnitine dehydratase {ECO:0000313|EMBL:GAD23502.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCNpilot_solid_1_scaffold_56_115
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102302..103282)
DNA (981bp) protein (327aa)
Sulfate ABC transporter, periplasmic sulfate-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TQU8_ALIDB
sulfate ABC transporter substrate-binding protein
Sulfate ABC transporter, periplasmic sulfate-binding protein {ECO:0000313|EMBL:ADV00184.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
SCNpilot_solid_1_scaffold_56_116
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103421..103897)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000367E811
Uncharacterized protein {ECO:0000313|EMBL:GAD20742.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_solid_1_scaffold_56_117
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103905..105398)
DNA (1494bp) protein (498aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit
NADH-quinone oxidoreductase subunit N n=2 Tax=Alicycliphilus denitrificans RepID=E8U1M0_ALIDB rbh
proton-translocating NADH-quinone oxidoreductase subunit n
SCNpilot_solid_1_scaffold_56_118
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105423..106895)
DNA (1473bp) protein (491aa)
Proton-translocating NADH-quinone oxidoreductase, chain M {ECO:0000313|EMBL:EER61862.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EER61862.1};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria;
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T108_ACIDE
proton-translocating NADH-quinone oxidoreductase subunit m
SCNpilot_solid_1_scaffold_56_119
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106909..108924)
DNA (2016bp) protein (672aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
UPI00039CED36 related cluster n=1 Tax=unknown RepID=UPI00039CED36 rbh
Proton-translocating NADH-quinone oxidoreductase subunit l {ECO:0000313|EMBL:GAD20738.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovor
Displaying items 91-120 of 486 in total

View Taxonomy