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SCNpilot_solid_1_scaffold_56

Search features with annotation key words

Displaying items 61-90 of 486 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_56_60
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51023..51796)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7A5_ALIDK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB84349.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_solid_1_scaffold_56_61
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51885..53420
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003810153 rbh
Predicted sugar kinase {ECO:0000313|EMBL:GAD24786.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;
carbohydrate kinase
SCNpilot_solid_1_scaffold_56_62
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53474..54133)
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TT63_ALIDB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99219.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_solid_1_scaffold_56_63
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54130..55134)
DNA (1005bp) protein (335aa)
mammalian cell entry protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003763CEB rbh
Mammalian cell entry related domain protein {ECO:0000313|EMBL:GAD24791.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="A
mammalian cell entry related domain-containing protein
SCNpilot_solid_1_scaffold_56_64
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55134..55940)
DNA (807bp) protein (269aa)
ABC transporter permease n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F5023 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD24792.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_solid_1_scaffold_56_65
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55953..56405)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL03 RepID=U9JR40_PSEAI
protein-S-isoprenylcysteine methyltransferase
Protein-S-isoprenylcysteine methyltransferase {ECO:0000313|EMBL:AJP48203.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclacea
SCNpilot_solid_1_scaffold_56_66
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56535..57029)
DNA (495bp) protein (165aa)
Transcription regulator MerR DNA binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TT60_ALIDB
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AEB85807.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
SCNpilot_solid_1_scaffold_56_67
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57033..59057
DNA (2025bp) protein (675aa)
ATPase P n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036D5612 rbh
Cation transport ATPase {ECO:0000313|EMBL:GAD24794.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
heavy metal translocating p-type atpase
SCNpilot_solid_1_scaffold_56_68
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59225..59632)
DNA (408bp) protein (136aa)
PilT protein domain protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTM4_SIDLE
PilT
PilT {ECO:0000313|EMBL:BAO29930.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
SCNpilot_solid_1_scaffold_56_69

Not on your lists

comp(59629..59943)
DNA (315bp) protein (105aa)
Transcriptional regulator, AbrB family protein n=1 Tax=mine drainage metagenome RepID=T0Y3E5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKN85590.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_solid_1_scaffold_56_70
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60097..60342)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034CEA43
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETW97075.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
SCNpilot_solid_1_scaffold_56_71
unknown

Not on your lists

comp(60453..60554)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_56_72
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(60551..61063)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003805DF0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ33611.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
SCNpilot_solid_1_scaffold_56_73
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61262..61711)
DNA (450bp) protein (150aa)
Helix-turn-helix protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GIC1_METAL
hypothetical protein Tax=CG_Rhodof_02
DNA-binding protein
SCNpilot_solid_1_scaffold_56_74
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61806..64001
DNA (2196bp) protein (732aa)
Type III restriction-modification system methylation subunit {ECO:0000313|EMBL:CDS51210.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CDS51210.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacte
DNA methylase N-4/N-6 domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ICF1_XANP2 rbh
DNA methylase N-4/N-6 domain-containing protein
SCNpilot_solid_1_scaffold_56_75
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64013..64315)
DNA (303bp) protein (101aa)
Plasmid maintenance system antidote protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NER3_9BURK
plasmid maintenance system antidote protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
plasmid maintenance system antidote protein
SCNpilot_solid_1_scaffold_56_76
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64328..64609)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AG84_9BACT
HigB toxin protein {ECO:0000313|EMBL:CDS51212.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
toxin HigB
SCNpilot_solid_1_scaffold_56_77
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64639..67602
DNA (2964bp) protein (988aa)
Restriction endonuclease subunit R {ECO:0000313|EMBL:KJA11913.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax t
DNA/RNA helicase, superfamily II id=12494250 bin=THIO_HI species=Rhodanobacter denitrificans genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
type III restriction protein res subunit
SCNpilot_solid_1_scaffold_56_78
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67711..68205
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1W935_ACISJ
Predicted metal-binding protein {ECO:0000313|EMBL:GAD24802.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
hypothetical protein
SCNpilot_solid_1_scaffold_56_79
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68224..70920)
DNA (2697bp) protein (899aa)
GCN5 family acetyltransferase n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003695061 rbh
Acyl-CoA synthetase {ECO:0000313|EMBL:GAD21297.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
gcn5-like n-acetyltransferase
SCNpilot_solid_1_scaffold_56_80
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71032..71217)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G481_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB85225.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_solid_1_scaffold_56_81
Betaproteobacteria bacterium MOLA814, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71462..73018)
DNA (1557bp) protein (519aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ESS13190.1}; EC=6.2.1.3 {ECO:0000313|EMBL:ESS13190.1};; TaxID=1408164 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="Betaproteobac
acyl-CoA synthetase (EC:2.3.1.86)
acyl-CoA synthetase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002E89E6C rbh
SCNpilot_solid_1_scaffold_56_82
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73037..74374)
DNA (1338bp) protein (446aa)
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TSI8_ALIDB rbh
three-deoxy-d-manno-octulosonic-acid transferase domain-containing protein
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein {ECO:0000313|EMBL:GAO22950.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
SCNpilot_solid_1_scaffold_56_83
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74384..75439)
DNA (1056bp) protein (352aa)
Phosphomannomutase n=1 Tax=Acidovorax sp. CF316 RepID=J0KEV2_9BURK
Phosphomannomutase {ECO:0000313|EMBL:EJE52195.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
phosphomannomutase
SCNpilot_solid_1_scaffold_56_84
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75405..75785)
DNA (381bp) protein (127aa)
phosphoglucomutase (EC:5.4.2.2)
Phosphomannomutase {ECO:0000313|EMBL:EED67550.1}; EC=5.4.2.8 {ECO:0000313|EMBL:EED67550.1};; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamo
Phosphomannomutase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WUN7_COMTE
SCNpilot_solid_1_scaffold_56_85
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

75905..76501
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8US41_9AQUI
Uncharacterized protein {ECO:0000313|EMBL:EDP76019.1}; TaxID=392423 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
nitric-oxide reductase subunit C
SCNpilot_solid_1_scaffold_56_86
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76515..77288
DNA (774bp) protein (258aa)
nitric-oxide reductase (EC:1.7.2.5)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000372FEBF
Nitric oxide reductase large subunit {ECO:0000313|EMBL:EIC28629.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="
SCNpilot_solid_1_scaffold_56_87
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77266..77850
DNA (585bp) protein (195aa)
nitric-oxide reductase (EC:1.7.2.5); K04561 nitric oxide reductase subunit B [EC:1.7.2.5] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000372FEBF
norB; Nitric-oxide reductase subunit B
SCNpilot_solid_1_scaffold_56_88
unknown

Not on your lists

77847..78146
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_56_89
unknown

Not on your lists

78149..78490
DNA (342bp) protein (114aa)

This feature has no annotations

Displaying items 61-90 of 486 in total

View Taxonomy