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SCNpilot_solid_1_scaffold_91

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_91_1
unknown

Not on your lists

1..90
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_91_2
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

544..876
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WRZ7_VEREI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM60404.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobact
SCNpilot_solid_1_scaffold_91_3
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

873..1190
DNA (318bp) protein (106aa)
Helix-turn-helix domain protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WRZ6_VEREI
helix-turn-helix domain-containing protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_solid_1_scaffold_91_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1921..2103)
DNA (183bp) protein (61aa)
YcfA family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVR8_ALIDB
hypothetical protein
YcfA family protein {ECO:0000313|EMBL:ADU99463.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitri
SCNpilot_solid_1_scaffold_91_5
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2190..2399
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000361E772
FIG00954026: hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_solid_1_scaffold_91_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2436..4442)
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZS38_DESOH rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO22704.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
hypothetical protein rbh
SCNpilot_solid_1_scaffold_91_7
unknown

Not on your lists

5960..6475
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_91_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6549..6689
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL04 RepID=U8MBF3_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ERV78220.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
hypothetical protein
SCNpilot_solid_1_scaffold_91_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6686..6889
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL04 RepID=U8MBL1_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ERV78221.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
XRE family transcriptional regulator
SCNpilot_solid_1_scaffold_91_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6965..7750)
DNA (786bp) protein (262aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
UPI00039ED855 related cluster n=1 Tax=unknown RepID=UPI00039ED855 rbh
PpiC-type peptidyl-prolyl cis-trans isomerase
SCNpilot_solid_1_scaffold_91_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7815..8108)
DNA (294bp) protein (98aa)
BolA family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TU26_ALIDB
bola family protein
BolA family protein {ECO:0000313|EMBL:GAO22617.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1
SCNpilot_solid_1_scaffold_91_12
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8105..8662)
DNA (558bp) protein (186aa)
septation protein A n=1 Tax=Variovorax paradoxus RepID=UPI00035C1FDA
intracellular septation protein a
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_solid_1_scaffold_91_13
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8702..9109)
DNA (408bp) protein (136aa)
methionine-R-sulfoxide reductase (EC:1.8.4.11)
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:ABM41867.1}; EC=1.8.4.11 {ECO:0000313|EMBL:ABM41867.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
Methionine-R-sulfoxide reductase n=2 Tax=Acidovorax RepID=A1W6J2_ACISJ
SCNpilot_solid_1_scaffold_91_14
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9106..10596)
DNA (1491bp) protein (497aa)
UPF0061 protein Ajs_1677 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6J3_ACISJ rbh
hypothetical protein
UPF0061 protein Ajs_1677 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (s
SCNpilot_solid_1_scaffold_91_15
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10745..12388
DNA (1644bp) protein (548aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:AEF90455.1}; EC=6.2.1.26 {ECO:0000313|EMBL:AEF90455.1};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
O-succinylbenzoate--CoA ligase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AX57_DELSC rbh
SCNpilot_solid_1_scaffold_91_16
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12520..13758
DNA (1239bp) protein (413aa)
Extracellular ligand-binding receptor n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VU5_RHOFD rbh
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) {ECO:0000313|EMBL:CDS49792.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales
extracellular ligand-binding receptor
SCNpilot_solid_1_scaffold_91_17
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13827..14774
DNA (948bp) protein (316aa)
ABC transporter permease n=1 Tax=Curvibacter lanceolatus RepID=UPI00036A0AF6 rbh
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:GAD23196.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
inner-membrane translocator
SCNpilot_solid_1_scaffold_91_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14788..16065
DNA (1278bp) protein (426aa)
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI0003652751
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ACS19548.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradox
SCNpilot_solid_1_scaffold_91_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16062..16832
DNA (771bp) protein (257aa)
ABC transporter related n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CNS0_VARPS rbh
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACS19547.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
SCNpilot_solid_1_scaffold_91_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16832..17527
DNA (696bp) protein (232aa)
Branched-chain amino acid transport system ATP-binding protein n=2 Tax=Delftia acidovorans RepID=S2X846_DELAC rbh
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:EPD41229.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delft
ABC transporter
SCNpilot_solid_1_scaffold_91_21
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17662..19143)
DNA (1482bp) protein (494aa)
dihydropyrimidine dehydrogenase subunit A n=1 Tax=Comamonas sp. B-9 RepID=UPI0003958158 rbh
gltD; glutamate synthase subunit beta
Glutamate synthase, NADH/NADPH, small subunit {ECO:0000313|EMBL:ACB35653.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholo
SCNpilot_solid_1_scaffold_91_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19197..23990)
DNA (4794bp) protein (1598aa)
Glutamate synthase (Ferredoxin) {ECO:0000313|EMBL:EIK91884.1}; EC=1.4.7.1 {ECO:0000313|EMBL:EIK91884.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
Glutamate synthase (Ferredoxin) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRP4_9BURK rbh
gltB; Ferredoxin-dependent glutamate synthase
SCNpilot_solid_1_scaffold_91_23
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24190..24858)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKL0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ08878.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC
hypothetical protein
SCNpilot_solid_1_scaffold_91_24
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24904..26331)
DNA (1428bp) protein (476aa)
Nitrogen metabolism transcriptional regulator NtrC n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP44_RUBGI rbh
ntrC; nitrogen metabolism transcriptional regulator NtrC; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
ntrC; nitrogen metabolism transcriptional regulator NtrC
SCNpilot_solid_1_scaffold_91_25
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26343..27434)
DNA (1092bp) protein (364aa)
ntrB; signal transduction histidine kinase, nitrogen specific, NtrB (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" sourc
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP43_RUBGI
SCNpilot_solid_1_scaffold_91_26
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27486..28703)
DNA (1218bp) protein (406aa)
diaminopimelate aminotransferase (EC:2.6.1.83)
LL-diaminopimelate aminotransferase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IGF3_9FIRM rbh
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-amin
SCNpilot_solid_1_scaffold_91_27
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28705..29541)
DNA (837bp) protein (279aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Clostridium sp. CAG:505 RepID=R7ALX9_9CLOT rbh
SCNpilot_solid_1_scaffold_91_28
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29554..30969)
DNA (1416bp) protein (472aa)
L-glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
L-glutamine synthetase (EC:6.3.1.2)
glutamine synthetase n=1 Tax=Caldimonas manganoxidans RepID=UPI00036552DA rbh
SCNpilot_solid_1_scaffold_91_29
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31241..33337
DNA (2097bp) protein (699aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EIK90091.1}; EC=1.1.1.35 {ECO:0000313|EMBL:EIK90091.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLK1_9BURK rbh
3-hydroxyacyl-CoA dehydrogenase
SCNpilot_solid_1_scaffold_91_30
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33428..34603
DNA (1176bp) protein (392aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ABM41876.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ABM41876.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
Acetyl-CoA acetyltransferase n=2 Tax=Acidovorax RepID=A1W6K1_ACISJ rbh
Displaying items 1-30 of 113 in total

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