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SCNpilot_solid_1_scaffold_105

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_105_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1497)
DNA (1497bp) protein (499aa)
60 kDa chaperonin n=2 Tax=Acidovorax sp. (strain JS42) RepID=CH60_ACISJ rbh
groEL; chaperonin GroEL
60 kDa chaperonin {ECO:0000255|HAMAP-Rule:MF_00600}; GroEL protein {ECO:0000255|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000255|HAMAP-Rule:MF_00600}; TaxID=232721 species="Bacteria; Proteobacteria; B
SCNpilot_solid_1_scaffold_105_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1620..1910)
DNA (291bp) protein (97aa)
molecular chaperone GroES n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003615FD0
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1268622 spec
groS; molecular chaperone GroES
SCNpilot_solid_1_scaffold_105_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2092..3183)
DNA (1092bp) protein (364aa)
Cytidyltransferase-related domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G726_ALIDK rbh
cytidyltransferase-like domain-containing protein
Cytidyltransferase-related domain protein {ECO:0000313|EMBL:AEB83192.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="
SCNpilot_solid_1_scaffold_105_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3180..4370)
DNA (1191bp) protein (397aa)
s-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TZN9_ALIDB
SCNpilot_solid_1_scaffold_105_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4512..5369
DNA (858bp) protein (286aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXF6_DELAS rbh
lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:ABX38232.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acid
SCNpilot_solid_1_scaffold_105_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5366..6253
DNA (888bp) protein (296aa)
lipid A biosynthesis acyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037FA903
Lauroyl/myristoyl acyltransferase {ECO:0000313|EMBL:GAD23081.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
lipid a biosynthesis acyltransferase
SCNpilot_solid_1_scaffold_105_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6328..7272)
DNA (945bp) protein (315aa)
alpha/beta fold family hydrolase id=12549483 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
alpha/beta fold family hydrolase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
alpha/beta fold family hydrolase
SCNpilot_solid_1_scaffold_105_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7325..8035)
DNA (711bp) protein (237aa)
GTP-binding protein YsxC n=1 Tax=Chryseobacterium taeanense RepID=UPI000311F728 rbh
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia aci
engB; ribosome biogenesis GTP-binding protein YsxC
SCNpilot_solid_1_scaffold_105_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8111..8731
DNA (621bp) protein (207aa)
cytochrome C n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI000369AFA6
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:ADU98595.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
SCNpilot_solid_1_scaffold_105_10
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8828..9823
DNA (996bp) protein (332aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precur
Sulfoxide reductase catalytic subunit YedY n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3Y2_ACISJ rbh
putative sulfite oxidase subunit YedY
SCNpilot_solid_1_scaffold_105_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9823..10476
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003654C0A rbh
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|HAMAP-Rule:MF_01207, ECO:0000256|SAAS:SAAS00016679}; Flavocytochrome YedZ {ECO:0000256|HAMAP-Rule:MF_01207}; TaxID=1268622 species="Bacteria;
ferric reductase
SCNpilot_solid_1_scaffold_105_12
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10503..11795)
DNA (1293bp) protein (431aa)
Diaminopimelate decarboxylase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDE3_ACIET rbh
diaminopimelate decarboxylase
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
SCNpilot_solid_1_scaffold_105_13
unknown

Not on your lists

comp(11792..11980)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_105_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11998..14379)
DNA (2382bp) protein (794aa)
Penicillin-binding protein, 1A family n=2 Tax=Alicycliphilus denitrificans RepID=E8TZQ7_ALIDB rbh
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ADU98604.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphi
penicillin-binding protein, 1a family
SCNpilot_solid_1_scaffold_105_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14615..15694
DNA (1080bp) protein (360aa)
Type IV pilus assembly protein PilM n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6N8_9BURK rbh
type IV pilus assembly protein PilM
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:AFU44576.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
SCNpilot_solid_1_scaffold_105_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15691..16302
DNA (612bp) protein (204aa)
Fimbrial assembly family protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W400_ACISJ rbh
Tfp pilus assembly protein PilN {ECO:0000313|EMBL:GAD23099.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
fimbrial assembly family protein
SCNpilot_solid_1_scaffold_105_17
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16305..16997
DNA (693bp) protein (231aa)
Pilus assembly protein, PilO n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TKV8_ACIAC rbh
pilus assembly protein PilO
Pilus assembly protein, PilO {ECO:0000313|EMBL:ABM31596.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source
SCNpilot_solid_1_scaffold_105_18
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16994..17551
DNA (558bp) protein (186aa)
Pilus assembly protein, PilQ n=2 Tax=Acidovorax RepID=A1W402_ACISJ
pilus assembly protein pilp
Pilus assembly protein PilP {ECO:0000313|EMBL:ACM32181.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source=
SCNpilot_solid_1_scaffold_105_19
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17548..19719
DNA (2172bp) protein (724aa)
Type IV pilus secretin PilQ n=2 Tax=Alicycliphilus denitrificans RepID=E8TZR2_ALIDB rbh
Type IV pilus secretin PilQ {ECO:0000313|EMBL:GAO26655.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilu
type IV pilus secretin pilq
SCNpilot_solid_1_scaffold_105_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19785..21266
DNA (1482bp) protein (494aa)
Ig family protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Ig family protein id=12549500 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
Ig family protein
SCNpilot_solid_1_scaffold_105_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21380..22486
DNA (1107bp) protein (369aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteoba
3-dehydroquinate synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U063_ALIDB rbh
SCNpilot_solid_1_scaffold_105_22
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22547..23701
DNA (1155bp) protein (385aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7R6_ALIDK rbh
deoxyguanosinetriphosphate triphosphohydrolase-like protein
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ali
SCNpilot_solid_1_scaffold_105_23
Alcaligenes sp. O-1, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23698..24897
DNA (1200bp) protein (400aa)
AbsT4 n=1 Tax=Alcaligenes sp. O-1 RepID=Q3LFL0_9BURK rbh
AbsT4 {ECO:0000313|EMBL:ABA54727.1}; TaxID=108557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. O-1.;"
transporter
SCNpilot_solid_1_scaffold_105_24
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24904..25500
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U065_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO26659.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
SCNpilot_solid_1_scaffold_105_25
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25497..26378
DNA (882bp) protein (294aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U066_ALIDB rbh
hypothetical protein
Methyltransferase domain-containing protein {ECO:0000313|EMBL:GAO26660.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sourc
SCNpilot_solid_1_scaffold_105_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26450..28534)
DNA (2085bp) protein (695aa)
TonB-dependent receptor n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4K8_9BURK rbh
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AFU46069.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
SCNpilot_solid_1_scaffold_105_27
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28661..29023)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000378B194
Uncharacterized protein {ECO:0000313|EMBL:GAD22523.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
SCNpilot_solid_1_scaffold_105_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29109..29918
DNA (810bp) protein (270aa)
Extracellular solute-binding protein family 3 n=2 Tax=Alicycliphilus denitrificans RepID=E8U073_ALIDB rbh
ABC transporter substrate-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ADU98621.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ali
SCNpilot_solid_1_scaffold_105_29
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29978..30631
DNA (654bp) protein (218aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Acidovorax delafieldii 2AN RepID=C5SZQ4_ACIDE rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EER62220.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.
polar amino acid ABC transporter permease
SCNpilot_solid_1_scaffold_105_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30612..31391
DNA (780bp) protein (260aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
Phosphonate-transporting ATPase {ECO:0000313|EMBL:AEB83229.1}; EC=3.6.3.28 {ECO:0000313|EMBL:AEB83229.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
Phosphonate-transporting ATPase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7S6_ALIDK rbh
Displaying items 1-30 of 101 in total

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