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SCNpilot_solid_1_scaffold_281

Search features with annotation key words

Displaying items 31-60 of 164 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_281_31
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30151..31155
DNA (1005bp) protein (335aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Acidovorax sp. CF316 RepID=J1EDG3_9BURK rbh
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EJE50314.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovora
NAD-dependent epimerase/dehydratase
SCNpilot_solid_1_scaffold_281_32
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31152..32066
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BRU1_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL24957.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
hypothetical protein
SCNpilot_solid_1_scaffold_281_33
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32401..33408
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE11 RepID=UPI00036C3111 rbh
hypothetical protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
hypothetical protein
SCNpilot_solid_1_scaffold_281_34
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33414..36434
DNA (3021bp) protein (1007aa)
CRISPR-associated protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z1Z5_9GAMM rbh
CRISPR-associated family protein {ECO:0000313|EMBL:KIN91512.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20
CRISPR-associated RAMP Crm2 family protein
SCNpilot_solid_1_scaffold_281_35
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36431..37939
DNA (1509bp) protein (503aa)
ATP-dependent DNA helicase n=1 Tax=Thauera phenylacetica B4P RepID=N6YWC5_9RHOO rbh
ATP-dependent DNA helicase {ECO:0000313|EMBL:ENO98571.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B
ATP-dependent DNA helicase rbh
SCNpilot_solid_1_scaffold_281_36
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37936..39057
DNA (1122bp) protein (374aa)
CRISPR-associated protein Cmr3 n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B6C67F rbh
CRISPR-associated Cmr3 family protein; K09127 hypothetical protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
CRISPR-associated Cmr3 family protein
SCNpilot_solid_1_scaffold_281_37
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39090..39983
DNA (894bp) protein (298aa)
CRISPR type III-B/RAMP module RAMP protein Cmr4 n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z1Z1_9GAMM rbh
CRISPR-associated RAMP Cmr4 family protein family protein; K09000 hypothetical protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
CRISPR-associated RAMP Cmr4 family protein family protein
SCNpilot_solid_1_scaffold_281_38
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39987..40346
DNA (360bp) protein (120aa)
CRISPR type III-B/RAMP module-associated protein Cmr5 n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z1Z0_9GAMM
CRISPR-associated Cmr5 family protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
CRISPR-associated Cmr5 family protein
SCNpilot_solid_1_scaffold_281_39
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40350..41624
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE11 RepID=UPI000373CCED rbh
RAMP superfamily protein {ECO:0000313|EMBL:KIN91363.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
CRISPR-associated RAMP Cmr6 family protein
SCNpilot_solid_1_scaffold_281_40
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41621..42574
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RP07_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV35489.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).
SCNpilot_solid_1_scaffold_281_41

Not on your lists

comp(42546..42968)
DNA (423bp) protein (141aa)
PilT protein n=1 Tax=mine drainage metagenome RepID=T0ZPP9_9ZZZZ
PilT protein {ECO:0000313|EMBL:EQD46482.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
twitching motility protein PilT
SCNpilot_solid_1_scaffold_281_42

Not on your lists

comp(42968..43258)
DNA (291bp) protein (97aa)
Uncharacterized protein y4eA n=1 Tax=sediment metagenome RepID=D9PJ00_9ZZZZ
Uncharacterized protein y4eA {ECO:0000313|EMBL:EFK96466.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
prevent-host-death family protein
SCNpilot_solid_1_scaffold_281_43
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43349..43666
DNA (318bp) protein (106aa)
CRISPR-associated protein, VVA1548 family n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RW28_ALLVD
CRISPR-associated protein VVA1548 family Tax=CG_Rhodof_02
CRISPR-associated protein, VVA1548 family
SCNpilot_solid_1_scaffold_281_44
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43663..44862
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82XX7_NITEU rbh
CRISPR-associated protein, family {ECO:0000313|EMBL:EXI76890.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp.
hypothetical protein rbh
SCNpilot_solid_1_scaffold_281_45
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44866..45966
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82XX9_NITEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD84024.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eur
SCNpilot_solid_1_scaffold_281_46
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46093..46371
DNA (279bp) protein (93aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomon
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0ADY6_NITEC
CRISPR-associated Cas2 family protein
SCNpilot_solid_1_scaffold_281_47
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46454..47485
DNA (1032bp) protein (344aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadal
CRISPR-associated endonuclease Cas1 n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0ADY5_NITEC
CRISPR-associated Cas1 family protein
SCNpilot_solid_1_scaffold_281_48
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47496..47762
DNA (267bp) protein (89aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomon
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0ADY4_NITEC
CRISPR-associated Cas2 family protein
SCNpilot_solid_1_scaffold_281_49
unknown

Not on your lists

comp(48837..49544)
DNA (708bp) protein (236aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_281_50
unknown

Not on your lists

51743..51850
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_281_51
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52170..53408
DNA (1239bp) protein (413aa)
RND transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00038063E9 rbh
Membrane-fusion protein {ECO:0000313|EMBL:GAD22229.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
efflux transporter, rnd family, mfp subunit
SCNpilot_solid_1_scaffold_281_52
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53412..56453
DNA (3042bp) protein (1014aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE46_ALIDK rbh
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:AEB84940.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliph
SCNpilot_solid_1_scaffold_281_53
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56528..57739
DNA (1212bp) protein (404aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003631D4F rbh
Predicted flavoproteins {ECO:0000313|EMBL:GAD21084.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hi0933 family protein
SCNpilot_solid_1_scaffold_281_54
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57814..59724)
DNA (1911bp) protein (637aa)
phenol 2-monooxygenase n=1 Tax=Curvibacter lanceolatus RepID=UPI00037EA1E7 rbh
tetracycline 6-hydroxylase
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_solid_1_scaffold_281_55
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59885..60319
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00035EF780
MarR family transcriptional regulator
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_solid_1_scaffold_281_56
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60502..60714
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=2 Tax=Burkholderiales RepID=RS21_LEPCP
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramliba
SCNpilot_solid_1_scaffold_281_57
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60801..61247
DNA (447bp) protein (149aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034DEBB2
GatB/YqeY domain-containing protein
GatB/YqeY domain-containing protein {ECO:0000313|EMBL:AEB84960.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
SCNpilot_solid_1_scaffold_281_58
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61304..62392
DNA (1089bp) protein (363aa)
tartrate dehydrogenase (EC:4.1.1.73)
Tartrate dehydrogenase {ECO:0000313|EMBL:ABM43001.1}; EC=1.1.1.93 {ECO:0000313|EMBL:ABM43001.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
Tartrate dehydrogenase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W9S6_ACISJ
SCNpilot_solid_1_scaffold_281_59
Aeromonas sp. L_1B5_3, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62480..63172)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9BY64_9RALS
Contig_42, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ79958.1}; TaxID=1588629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromo
SCNpilot_solid_1_scaffold_281_60
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63376..63873)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Comamonas testosteroni RepID=UPI000313A9B1
Uncharacterized protein {ECO:0000313|EMBL:KGH29701.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Ps
hypothetical protein
Displaying items 31-60 of 164 in total

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