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SCNpilot_solid_1_scaffold_281

Search features with annotation key words

Displaying items 1-30 of 164 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_281_1
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166..690)
DNA (525bp) protein (175aa)
nicotinate phosphoribosyltransferase n=1 Tax=Acidovorax radicis RepID=UPI0002378682
phosphoribosyltransferase
Putative phosphoribosyltransferase {ECO:0000313|EMBL:EJE55065.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
SCNpilot_solid_1_scaffold_281_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(752..2125)
DNA (1374bp) protein (458aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00
Adenylosuccinate synthetase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=PURA_ACIET rbh
SCNpilot_solid_1_scaffold_281_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2164..3312)
DNA (1149bp) protein (383aa)
ATP phosphoribosyltransferase regulatory subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TWW3_ALIDB rbh
histidyl-tRNA synthetase 2
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
SCNpilot_solid_1_scaffold_281_4
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3561..4460)
DNA (900bp) protein (300aa)
Protein HflC n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8M5_9BURK
HflC protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
HflC protein
SCNpilot_solid_1_scaffold_281_5
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4470..5840)
DNA (1371bp) protein (457aa)
HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-] Tax=GWA2_Curvibacter_64_110_curated
HflK protein n=1 Tax=Polaromonas sp. CF318 RepID=J3D008_9BURK rbh
HflK protein
SCNpilot_solid_1_scaffold_281_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5880..7061)
DNA (1182bp) protein (394aa)
GTP-binding proten HflX n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365BB13 rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
GTP-binding proten HflX
SCNpilot_solid_1_scaffold_281_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7114..7401)
DNA (288bp) protein (96aa)
RNA-binding protein Hfq n=2 Tax=Alicycliphilus denitrificans RepID=E8TWW8_ALIDB
RNA chaperone Hfq
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicyclip
SCNpilot_solid_1_scaffold_281_8
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7451..8794)
DNA (1344bp) protein (448aa)
GTPase Der n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=DER_ACIET rbh
engA; GTP-binding protein enga
GTPase Der {ECO:0000255|HAMAP-Rule:MF_00195}; GTP-binding protein EngA {ECO:0000255|HAMAP-Rule:MF_00195}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
SCNpilot_solid_1_scaffold_281_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8810..9946)
DNA (1137bp) protein (379aa)
Outer membrane protein assembly factor BamB n=2 Tax=Alicycliphilus denitrificans RepID=E8TWX0_ALIDB rbh
outer membrane assembly lipoprotein yfgl
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
SCNpilot_solid_1_scaffold_281_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9943..10602)
DNA (660bp) protein (220aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003807CED
Uncharacterized protein {ECO:0000313|EMBL:GAD24225.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_solid_1_scaffold_281_11
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10618..11907)
DNA (1290bp) protein (430aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000255|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00127}; Short=HisRS {ECO:0000255|HAMAP-Rul
Histidine--tRNA ligase n=1 Tax=Acidovorax sp. (strain JS42) RepID=SYH_ACISJ rbh
SCNpilot_solid_1_scaffold_281_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11985..13271)
DNA (1287bp) protein (429aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hyd
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXJ5_ALIDB
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
SCNpilot_solid_1_scaffold_281_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13272..14183)
DNA (912bp) protein (304aa)
UPI0003A6C2AD related cluster n=1 Tax=unknown RepID=UPI0003A6C2AD
Uncharacterized protein {ECO:0000313|EMBL:GAD24228.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_solid_1_scaffold_281_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14176..15027)
DNA (852bp) protein (284aa)
Type IV pilus biogenesis/stability protein PilW n=2 Tax=Alicycliphilus denitrificans RepID=E8TXJ7_ALIDB rbh
type IV pilus biogenesis/stability protein PilW
Type IV pilus biogenesis/stability protein PilW {ECO:0000313|EMBL:ADV00765.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
SCNpilot_solid_1_scaffold_281_15
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15027..16145)
DNA (1119bp) protein (373aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000255|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000255|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000255|HAMAP-Rule:
Dual-specificity RNA methyltransferase RlmN n=2 Tax=Acidovorax RepID=RLMN_ACISJ rbh
radical sam enzyme, cfr family
SCNpilot_solid_1_scaffold_281_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16192..16617)
DNA (426bp) protein (142aa)
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
Nucleoside diphosphate kinase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXJ9_ALIDB
SCNpilot_solid_1_scaffold_281_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16692..17921)
DNA (1230bp) protein (410aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
Pseudouridine synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXK0_ALIDB rbh
pseudouridine synthase
SCNpilot_solid_1_scaffold_281_18
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17902..18552)
DNA (651bp) protein (217aa)
Chromosome segregation and condensation protein, ScpB n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4B1_ACIDE
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acido
chromosome segregation and condensation protein ScpB
SCNpilot_solid_1_scaffold_281_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18714..19712)
DNA (999bp) protein (333aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
pseudouridine synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000378245D
SCNpilot_solid_1_scaffold_281_20
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19709..20590)
DNA (882bp) protein (294aa)
Peptidase M23B n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W569_ACISJ rbh
peptidase M23B
Peptidase M23B {ECO:0000313|EMBL:ABM41394.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s
SCNpilot_solid_1_scaffold_281_21
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20613..21389)
DNA (777bp) protein (259aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:ABM41393.1}; EC=2.1.1.77 {ECO:0000313|EMBL:ABM41393.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W568_ACISJ rbh
SCNpilot_solid_1_scaffold_281_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21386..22159)
DNA (774bp) protein (258aa)
surE; stationary phase survival protein SurE (EC:3.1.3.6); K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
surE; stationary phase survival protein SurE (EC:3.1.3.6); K03787 5'-nucleotidase [EC:3.1.3.5] id=12552302 bin=BDI species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
stationary phase survival protein SurE
SCNpilot_solid_1_scaffold_281_23
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22290..23270
DNA (981bp) protein (327aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase n=1 Tax=Polaromonas sp. CF318 RepID=J3CTN3_9BURK rbh
Zn-dependent oxidoreductase, NADPH:quinone reductase {ECO:0000313|EMBL:EJL77971.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;"
zinc-binding alcohol dehydrogenase
SCNpilot_solid_1_scaffold_281_24
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23339..24862
DNA (1524bp) protein (508aa)
diguanylate cyclase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037BF437 rbh
Diguanylate cyclase {ECO:0000313|EMBL:GAD24239.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
diguanylate cyclase
SCNpilot_solid_1_scaffold_281_25
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24886..25323)
DNA (438bp) protein (146aa)
Putative signal-transduction protein with CBS domains n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W9Q0_ACISJ
signal-transduction protein
Putative signal-transduction protein with CBS domains {ECO:0000313|EMBL:ABM42975.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
SCNpilot_solid_1_scaffold_281_26
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25577..26182
DNA (606bp) protein (202aa)
Candidate glutathione S-transferase (Glutathione transferase) n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y2F0_RAMTT
gst; glutathione S-transferase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_solid_1_scaffold_281_27
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26195..26959)
DNA (765bp) protein (255aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J0K9N3_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJE50310.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF31
IclR family transcriptional regulator
SCNpilot_solid_1_scaffold_281_28
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27058..27900
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1ED43_9BURK rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:EYC52355.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracil
short chain dehydrogenase
SCNpilot_solid_1_scaffold_281_29
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27897..29213
DNA (1317bp) protein (439aa)
Putative flavoprotein involved in K+ transport n=1 Tax=Acidovorax sp. CF316 RepID=J0U2C6_9BURK rbh
Putative flavoprotein involved in K+ transport {ECO:0000313|EMBL:EJE50312.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
faD-dependent pyridine nucleotide-disulfide oxidoreductase
SCNpilot_solid_1_scaffold_281_30
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29228..30154
DNA (927bp) protein (309aa)
Bile acid:sodium symporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0ID65_9BURK rbh
bile acid:sodium symporter
Bile acid:sodium symporter {ECO:0000313|EMBL:AFU47251.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS1
Displaying items 1-30 of 164 in total

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