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SCNpilot_solid_1_scaffold_357

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_357_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(803..1258)
DNA (456bp) protein (152aa)
HK97 family phage portal protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ53_9BURK
HK97 family phage portal protein
HK97 family phage portal protein {ECO:0000313|EMBL:AFU46132.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
SCNpilot_solid_1_scaffold_357_2
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1305..1550
DNA (246bp) protein (82aa)
UPI0003D5DB6D related cluster n=1 Tax=unknown RepID=UPI0003D5DB6D
putative short chain dehydrogenase
Putative short chain dehydrogenase {ECO:0000313|EMBL:AHC49196.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromo
SCNpilot_solid_1_scaffold_357_3
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1562..1852
DNA (291bp) protein (97aa)
Uncharacterized protein n=3 Tax=Bordetella bronchiseptica RepID=K0MQW2_BORBM
Stress responsive A/B barrel domain protein {ECO:0000313|EMBL:KCV62056.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="B
hypothetical protein
SCNpilot_solid_1_scaffold_357_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1932..2516)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA97_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI50391.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_1_scaffold_357_5
Renibacterium salmoninarum, Renibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2574..3479)
DNA (906bp) protein (302aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=288705 species="Bacteria; Actinob
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235) RepID=A9WQX6_RENSM
SCNpilot_solid_1_scaffold_357_6
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3555..4904)
DNA (1350bp) protein (450aa)
Ferric reductase domain protein protein transmembrane component domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7N4_STAND rbh
ferric reductase transmembrane domain-containing protein Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
ferric reductase transmembrane domain-containing protein
SCNpilot_solid_1_scaffold_357_7
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5115..5753)
DNA (639bp) protein (213aa)
scoB; succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B protein (EC:2.8.3.5) rbh
Putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B protein {ECO:0000313|EMBL:CCN21148.1}; EC=2.8.3.5 {ECO:0000313|EMBL:CCN21148.1};; TaxID=1208657 species="Bacteria; Proteobacteria; Bet
Putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B protein n=1 Tax=Bordetella bronchiseptica D445 RepID=K4TJ90_BORBO rbh
SCNpilot_solid_1_scaffold_357_8
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5765..6472)
DNA (708bp) protein (236aa)
scoA; 3-oxoacid CoA-transferase subunit A (EC:2.8.3.5) rbh
3-oxoacid CoA-transferase subunit A {ECO:0000313|EMBL:CAP41507.1}; EC=2.8.3.5 {ECO:0000313|EMBL:CAP41507.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcal
3-oxoacid CoA-transferase subunit A n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IC06_BORPD rbh
SCNpilot_solid_1_scaffold_357_9
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6628..7533)
DNA (906bp) protein (302aa)
LysR family regulatory protein n=3 Tax=Bordetella bronchiseptica RepID=K0MCM0_BORBM rbh
LysR family regulatory protein rbh
LysR substrate-binding domain protein {ECO:0000313|EMBL:KDD59676.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete
SCNpilot_solid_1_scaffold_357_10
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7876..8691
DNA (816bp) protein (272aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) RepID=Q7WCG4_BORPA rbh
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:CAE35945.1}; TaxID=257311 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="B
SCNpilot_solid_1_scaffold_357_11
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8782..9942
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase%2C short-chain specific {ECO:0000313|EMBL:CKI03009.1}; EC=1.3.8.1 {ECO:0000313|EMBL:CKI03009.1};; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
UPI0003D69AF3 related cluster n=1 Tax=unknown RepID=UPI0003D69AF3 rbh
Butyryl-CoA dehydrogenase
SCNpilot_solid_1_scaffold_357_12
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10185..10682
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000377C421
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW89573.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
SCNpilot_solid_1_scaffold_357_13
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10811..12841
DNA (2031bp) protein (677aa)
2%2C4-dienoyl-CoA reductase [NADPH] {ECO:0000313|EMBL:CKI02739.1}; EC=1.3.1.34 {ECO:0000313|EMBL:CKI02739.1};; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcal
2,4-dienoyl-CoA reductase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QF13_RALPI rbh
2,4-dienoyl-CoA reductase
SCNpilot_solid_1_scaffold_357_14
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12896..13663
DNA (768bp) protein (256aa)
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:CKI02686.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CKI02686.1};; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
UPI0003D6962E related cluster n=1 Tax=unknown RepID=UPI0003D6962E rbh
3-oxoacyl-[acyl-carrier protein] reductase
SCNpilot_solid_1_scaffold_357_15
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13866..14531)
DNA (666bp) protein (222aa)
Membrane protein n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PSN8_9BURK rbh
membrane protein
Membrane protein {ECO:0000313|EMBL:AHB05695.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
SCNpilot_solid_1_scaffold_357_16
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14554..16173)
DNA (1620bp) protein (540aa)
MscS Mechanosensitive ion channel n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBN4_GEOUR rbh
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ABQ25014.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;
SCNpilot_solid_1_scaffold_357_17
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16202..17473)
DNA (1272bp) protein (424aa)
Amidohydrolase n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PRU3_9BURK rbh
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHB05696.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
SCNpilot_solid_1_scaffold_357_18
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17730..18314)
DNA (585bp) protein (195aa)
lipoprotein id=12494735 bin=THIO_HI species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:KGH14716.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Ps
putative lipoprotein
SCNpilot_solid_1_scaffold_357_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18861..20213
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WS68_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD42166.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
integrase family protein
SCNpilot_solid_1_scaffold_357_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20210..21274
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WW33_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD42165.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
SCNpilot_solid_1_scaffold_357_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21641..22033
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XRR4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42164.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
vacuolar-type H+ATPase subunit A
SCNpilot_solid_1_scaffold_357_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22327..22677
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WQU7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42163.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
transposase
SCNpilot_solid_1_scaffold_357_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23397..24221
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XAB6_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD42162.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
SCNpilot_solid_1_scaffold_357_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24287..26482
DNA (2196bp) protein (732aa)
ParB family chromosome partitioning protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WS63_DELAC rbh
ParB family chromosome partitioning protein {ECO:0000313|EMBL:EPD42161.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delft
nuclease
SCNpilot_solid_1_scaffold_357_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26591..27286)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WW26_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD42160.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
TetR family transcriptional regulator
SCNpilot_solid_1_scaffold_357_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27510..29075
DNA (1566bp) protein (522aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XRQ8_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD42159.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
SCNpilot_solid_1_scaffold_357_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29111..30298
DNA (1188bp) protein (396aa)
propanoyl-CoA c-acyltransferase (EC:2.3.1.176) rbh
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WQU2_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD42158.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
SCNpilot_solid_1_scaffold_357_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30310..31119
DNA (810bp) protein (270aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XAB2_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD42157.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
SCNpilot_solid_1_scaffold_357_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31157..32353
DNA (1197bp) protein (399aa)
Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WS58_DELAC rbh
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:EPD42156.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
extracellular ligand-binding receptor
SCNpilot_solid_1_scaffold_357_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32402..33259
DNA (858bp) protein (286aa)
Branched-chain amino acid transport system permease n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WW18_DELAC rbh
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:EPD42155.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" sourc
ABC transporter permease
Displaying items 1-30 of 115 in total

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