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SCNpilot_solid_1_scaffold_4114

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_4114_1

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1..255
DNA (255bp) protein (85aa)
Elongation factor Tu (EF-Tu) (P-43) n=1 Tax=mine drainage metagenome RepID=E6PK11_9ZZZZ
Elongation factor Tu (EF-Tu) (P-43) {ECO:0000313|EMBL:CBH95262.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
translation elongation factor Tu
SCNpilot_solid_1_scaffold_4114_trna_1
unknown

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272..351
DNA (80bp)
transferRNA
SCNpilot_solid_1_scaffold_4114_2
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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427..810
DNA (384bp) protein (128aa)
Protein translocase subunit SecE n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0IXK3_COMT2
preprotein translocase, SecE subunit
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas tes
SCNpilot_solid_1_scaffold_4114_3
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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810..1397
DNA (588bp) protein (196aa)
Transcription termination/antitermination protein NusG n=1 Tax=Acidovorax sp. NO-1 RepID=H0C452_9BURK rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
NusG antitermination factor
SCNpilot_solid_1_scaffold_4114_4
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1525..1956
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Comamonas sp. B-9 RepID=UPI000395637F
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreu
SCNpilot_solid_1_scaffold_4114_5
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1957..2652
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Acidovorax avenae RepID=UPI000370CDDD rbh
rplA; 50S ribosomal protein l1; K02863 large subunit ribosomal protein L1 Tax=GWA2_Curvibacter_64_110_curated
rplA; 50S ribosomal protein L1
SCNpilot_solid_1_scaffold_4114_6
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2890..3396
DNA (507bp) protein (169aa)
50S ribosomal protein L10 n=2 Tax=Acidovorax RepID=RL10_ACIAC
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovo
SCNpilot_solid_1_scaffold_4114_7
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3449..3829
DNA (381bp) protein (127aa)
50S ribosomal protein L7/L12 n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WY92_COMTE
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testost
SCNpilot_solid_1_scaffold_4114_8
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4109..8110
DNA (4002bp) protein (1334aa)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=RPOB_ACIAC rbh
SCNpilot_solid_1_scaffold_4114_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8238..11069
DNA (2832bp) protein (944aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=2 Tax=Alicycliphilus denitrificans RepID=E8TVM6_ALIDB
DNA-directed RNA polymerase subunit beta'
SCNpilot_solid_1_scaffold_4114_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11066..11896
DNA (831bp) protein (277aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000370E869
Displaying 11 items

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