ggKbase home page

SCNpilot_solid_1_scaffold_13_20

Organism: SCNPILOT_SOLID_1_Burkholderiales_65_210

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(17230..18918)

Top 3 Functional Annotations

Value Algorithm Source
Sigma54-specific transcriptional regulator n=1 Tax=Diaphorobacter sp. PCA039 RepID=C0KGK9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 559.0
  • Bit_score: 825
  • Evalue 3.00e-236
  • rbh
Sigma54-specific transcriptional regulator {ECO:0000313|EMBL:ACN62952.1}; TaxID=266831 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Diaphorobacter.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 559.0
  • Bit_score: 825
  • Evalue 4.20e-236
sigma-54 dependent trancsriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 556.0
  • Bit_score: 820
  • Evalue 2.70e-235

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Diaphorobacter sp. PCA039 → Diaphorobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1689
ATGAACACCACGCTTCCCCCCATGCCGTCCGACCGGGATCTGCGCCGCCTGGTGCACTTTTCCCCCAGCGATGGCCGCATCTGGCTGGCCGATCAGCGCATGGCGCTCCTGCACACGGCGGCGCTGAGCGCGCTGCGACGCGAACTCATGACGACGCTGGGGCCGGTGCAGACACGGCGCGTGCTGATGCGCGCGGGCTACGCCTCCGGCGAGCGCGACGCGCTGCTGGCGCGCCAGATACGGCGCGACGCCTCGCTGTTCGAGGCCTTTTCCGTCGGCCCGCAGCTGCACATGCTCGAAGGCGCCGTGCAGGTCACGCCCCAGACCTTCGAGGTAAACGAAGACGAGGGCCACTACCTCGGGCACTACCGCTGGGACCACAGCTGGGAGGTGGAGGTGCACCTGCGCGAGTTCGGCCCGCAGGCCGAGCCGGTCTGCTGGATGCTGCTGGGCTATGCCTCGGGCTACACCAGCGCGTTCTTCGGCCGTTCGGTGCTCTACAAGGAGGTGCAGTGCGTGGCCTGCGGCGCGCCACACTGCCGCATCGAGGGGCGCTTCGCCGAGGAGTGGCCCGACGGCGACGCCATGGCGCGCGACTACGACGCCGACTCCATGCTGGTCAAGCTCGAAGAGCTGCAGTCGCAGGTGCACAGCCTGCGCACGCAGCTGCAGCCGGCGGACGAGCAGGGGCCGCTGGTCGGCCAGTCGCCCGCCTTCGTGCAGACCATCGAGCTGCTGCGCAAGGCGGCGCAGACGCAGGTCACCGTGCTGCTCACGGGCGAGACCGGCGTGGGCAAGGAGCGCTTCGCGCGGGCGCTGCACGCGATGAGCGCGCGCGCCGACAAGCCCTTCGTCGCGATCAACTGCGCGGCGCTGCCGGCCGAGCTGATCGAAAGCGAGCTGTTCGGCGCGGAGAAGGGGGCCTACACCGGCGCCGCCGCCACGCGCGTGGGGCGCTTCGAACGGGCGCACGGCGGCACGCTGATGCTCGACGAGCTCGGCGAGCTGCCCCTGCCCGCGCAGGCCAAGCTGCTGCGCGTGCTGCAGAGCGGCGAGATCGACCGCCTGGGCGCGGCGGCGCCGCGCAAGGTGGACGTGCGCGTCGTCGCGGCCACCAACGTTGATCTGGCGCAGGCGGTGCGCGAAGGGCGCTTCCGCCAGGATCTGCTCTACCGGCTCAACGTCTACCCCATCCGCATCCCGCCCCTGCGCGAGCGGCTGGACGACATCGAGCCGCTGGCCCTGCACCTGCTCGACAAATACGTGGCGCAGCACGGCAAGCGCGCGCTCGGTTTCACCGACCGCGCACTGGCTGCGATGCGCGCCTACCCCTGGCCGGGCAACGTGCGCGAACTGGAGAACCTGATCGAGCGCGGCATCATTCTTGCGTCGGCCGGCGCAACGGTCGACGCCGAAACCCTGTTCCCGCACCTGCCAGCGGCGGGTGGCACCACCGTGAACCCCGGTGGTGCGCTGGAGCCGGCGCAGTCACCGGCCGACCAGGCCCAGGCCGGCGACCTGTACGAACAGCTGCAGCAAAGCGGCATGACGCTGGAGGTACTGGAAAACACGCTGCTGCGCGAGGCGGTGGCGCGCGCGGGCGGCAACCTTGCCGCCGCGGCGCGCGCACTGGGGCTCACGCGCGCGCAACTCAGCTACCGCCTCTCGCGCCTGCAACAGGAGGAATGA
PROTEIN sequence
Length: 563
MNTTLPPMPSDRDLRRLVHFSPSDGRIWLADQRMALLHTAALSALRRELMTTLGPVQTRRVLMRAGYASGERDALLARQIRRDASLFEAFSVGPQLHMLEGAVQVTPQTFEVNEDEGHYLGHYRWDHSWEVEVHLREFGPQAEPVCWMLLGYASGYTSAFFGRSVLYKEVQCVACGAPHCRIEGRFAEEWPDGDAMARDYDADSMLVKLEELQSQVHSLRTQLQPADEQGPLVGQSPAFVQTIELLRKAAQTQVTVLLTGETGVGKERFARALHAMSARADKPFVAINCAALPAELIESELFGAEKGAYTGAAATRVGRFERAHGGTLMLDELGELPLPAQAKLLRVLQSGEIDRLGAAAPRKVDVRVVAATNVDLAQAVREGRFRQDLLYRLNVYPIRIPPLRERLDDIEPLALHLLDKYVAQHGKRALGFTDRALAAMRAYPWPGNVRELENLIERGIILASAGATVDAETLFPHLPAAGGTTVNPGGALEPAQSPADQAQAGDLYEQLQQSGMTLEVLENTLLREAVARAGGNLAAAARALGLTRAQLSYRLSRLQQEE*